Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02601 ATGATGATTTTGTTCATATGGATTCCATCTCTAATCTTCCTCTTGTCTTCTCTACTACTGTTTGTTAAAACAAAGACACACGAAAACAACAAGAAGATTTCCCTTCCTCCTCCAATCCCTCCAAAGCTTCCTTTCTTGGGTCATTTGCACCTCATTATTGCCTCTCTTCCCCATCGCTCTTTTCATAAGCTTTCAAAAAAATACGGTCCTGTAATGCTCCTTAAACTCGGCTCTGTTCCAACCATCATAGTCTCCTCCGCATCCGCTGCAAGACAACTATTCAAACTTCACGATCTTGCTTCTTGTAGCCGACCGCCTTTATCCGGTACTCGAAGATTGTCATACAACTATCTCGACATAAGCTTCTCTCCATATGGTCATCACTGGAGGGAAGTTCGAAAAATTTGTGTTCTTGAGTTGTTCAGTGCTAAACGAGTGCAGTCATTTCAAGGGATAAGAGAACAAGAGGTGGGTTTGTTGTTAAATTCCATCTCTCATTTTGCATCTACTGCCACTCCTGTTGATTTGAGTCAGAAATCGTATTCAATCACTGCCAATATAATAACTCGGATTGCTTTTGGGAAGAGCTTTCGAGGGGGTGAATTAGATAATGAGAATTTTCAATCAGTGGTTCGTAGAGCATTAGCGGTATTGGGAAGTTTCTCTGCCACTGATTTTTTTCCTAATGTTGGTTGGATTATTGATTGGGTTATTGGTGTTCGTGGAAGATTTGAAAAGAGCTTTGCTGAGTTGGATGCTTTTTTTCAACATGTAATTGATGATCGAATCAATAACTTTGTTGGGACAAGTTCGCAAAATGAAGGAAATGTTATTGTTGATGTTTTGTTGAAGATTGAGAGAGAACAATCTGAATTTGATTCTCTGCAGCTCACTACGGATTGCATCAAGGCACTTATCATGGACATATTTCTAGCCGGAGTTGACACAGGTGCAAGTGTCATTGTTTGGGCAATGGCAGAGCTAACTAAGAATCCAAAGGTGATGAAAAAGTTACAAGATGAAATTAGATACGCCATAAAAGAAGATCAAGTGAAAGAAAGTGAACTCGAAAAACTTGAATACCTTAAAATGGTGGTAAAAGAAGTTCTAAGATTACATGTGCCAGCCCCACTTCTCCTTCCTAGACAAACCATGTCACATTTCAAGCTTGATGGTTACGATATTGACCCCAAATCTCATCTCTATGTCAATGCTTGGGCAATTGCGCGAGACCCAAATTATTGGTTTAACCCAGAAGAATTCTTGCCGGAGAGATTTATGGGAAGTAATATAGATTACAGAGGACAAAATTTTGAGTTATTGCCGTTCGGAGCTGGTCGAAGAAGTTGTCCAGGGATGAACATGGCAATCGCTACGGTGGAGCTCACGTTGGCTAATTTATTGCTTCGTTTTGATTGGAAATTACCAGATGGAATGAAAGAAGATGACGTGAACATGGAAGAAGATGCTGGGCTAACTGTTACTAAGAAATCACCTCTTAAACTTGTTCCAATCAACTTCTCCAGAGTTTAG 1533 39.92 MMILFIWIPSLIFLLSSLLLFVKTKTHENNKKISLPPPIPPKLPFLGHLHLIIASLPHRSFHKLSKKYGPVMLLKLGSVPTIIVSSASAARQLFKLHDLASCSRPPLSGTRRLSYNYLDISFSPYGHHWREVRKICVLELFSAKRVQSFQGIREQEVGLLLNSISHFASTATPVDLSQKSYSITANIITRIAFGKSFRGGELDNENFQSVVRRALAVLGSFSATDFFPNVGWIIDWVIGVRGRFEKSFAELDAFFQHVIDDRINNFVGTSSQNEGNVIVDVLLKIEREQSEFDSLQLTTDCIKALIMDIFLAGVDTGASVIVWAMAELTKNPKVMKKLQDEIRYAIKEDQVKESELEKLEYLKMVVKEVLRLHVPAPLLLPRQTMSHFKLDGYDIDPKSHLYVNAWAIARDPNYWFNPEEFLPERFMGSNIDYRGQNFELLPFGAGRRSCPGMNMAIATVELTLANLLLRFDWKLPDGMKEDDVNMEEDAGLTVTKKSPLKLVPINFSRV 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37242515 37244534 - ClCG05G025940.1 Cla05g02601 274091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02601 510 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 Pfam Cytochrome P450 37 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 Gene3D Cytochrome P450 20 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PANTHER CYTOCHROME P450 71B16-RELATED 6 507 - -
Cla05g02601 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Cla05g02601 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02601 510 PANTHER CYTOCHROME P450 71B11-RELATED 6 507 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00558 Cla-Chr2:5902632 Cla05g02601 Cla-Chr5:37242515 8.46E-09 dispersed
Cla05g02601 Cla-Chr5:37242515 Cla05g02608 Cla-Chr5:37303566 0 dispersed
Cla05g02599 Cla-Chr5:37236335 Cla05g02601 Cla-Chr5:37242515 0 proximal
Cla05g02601 Cla-Chr5:37242515 Cla05g02602 Cla-Chr5:37249721 6.90E-151 tandem
Cla05g02601 Cla-Chr5:37242515 Cla06g01705 Cla-Chr6:30628085 1.35E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02601 - K01773 csv:101216707 679.863