Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02603 ATGCATTATTTCATTTGGGTTCCTCTTCTTTTTCTGTTAATTCCTCTATTTCTTCTCATAACCAAAAAGCTTCTTCACAACAACGAGAAGAAGGTGGTTAACGTTCCTCCTCCAAGCCCTCCAAAGCTTCCATTTTTGGGTCATTTACACCTCCTTGGCTCTCACCCACATCGCTCTTTATGGAACCTTTCAAAAAAACACGGCCCCATCATGCTCCTCAAACTCGGCTGTGTTCCTACCGTCATCATATCTTCAGCAGCCGTCGCAAGAGGGCTATTCAAACACCACGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACAGGCAGTGGAAGATTTTCATACAACTTTCAAGACCTGAATTTATCCCCATATGGTGAGCGTTGGAGAGAGCTTCGAAAGATTTTTATACTTGAACTCTTCAGCACCAAGCGAGTACAATCATTTCAACATATTAGAGAAGAGGAAGTGGGTAAGCTATTAAAGATCATATCTAATTCCGCATCTCTTGGAACTCCAATTGATTTGAGTCAAACCATATATACTCTTACTGCAAATATAACCTTCCGAATTGCTTTCGGTAAAAGCTTTAGTGGGGGAGAATTAGATAATGAGAATTTTCAACACATCATTCGTAGAGCAATGGTTGCATTAGGAAGCTTCTCGGCGACTGATTTCTTTCCTGGTGTGGGTTGGATTATTGATCGGCTGAGTGGTGTTCATGGGATATTGGAGAAGAGCTTTGCTGAAGTGGATGCCATTTTTCAACAGGTAGTTGATGATCGCATCAAATTCTTGGAAATTTCTCGAAATGAAGAAAATATTGTTGATGTTTTGTTGAGAATGGAGAGAGACAGCTCAAAATTTGATGCAGTGAAATTTACCCAAGATCGTGTTAAGGCACTTATCATGGATATATTTCTAGCTGGAGTGGAAACAGGAGAAAACACCATAGTTTGGGCAATGACAGAAATTGTTAGAAACCCAAGAGTGATGAAAAGGCTACAAGATGAGATTAGAAGCTACGTCAAAGAAGATCGAGTGAAAGAAAGCGACCTTGAAAAGCTTCAATATTTAAAAATGGTGATAAAAGAAGTTTTAAGGCTTCATCCGCCCGTCCCACTTCTTCTACCAAGAGAAACAATGTCACAATTTAAGCTCAATGGTTATGATATTCATTCCAAAACCCATCTTTATGTGAATGCATGGGCAATTGGACGAGACCCAGAATGTTGGACAAACCCACTAGAGTTTTTCCCAGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAACATTTTGAGTTAATACCATTTGGAGCTGGTAGAAGAATTTGTCCAGGAATGAATATGGGGATTATTACTGTGGAGCTTGCATTAGCAAATATGCTGTTGTGCTTTAATTGGAAACTGCTAAATGGAATGAAGGAAGAGGATGTGGACATGGAAGAAGACACTGGTCTTTCAGCTTCCAAGAAATTGCCTCTTCAACTTCTTCCAATCCCTTACTTCAGCTCGGATTATTAA 1527 39.88 MHYFIWVPLLFLLIPLFLLITKKLLHNNEKKVVNVPPPSPPKLPFLGHLHLLGSHPHRSLWNLSKKHGPIMLLKLGCVPTVIISSAAVARGLFKHHDLASCSRPRLTGSGRFSYNFQDLNLSPYGERWRELRKIFILELFSTKRVQSFQHIREEEVGKLLKIISNSASLGTPIDLSQTIYTLTANITFRIAFGKSFSGGELDNENFQHIIRRAMVALGSFSATDFFPGVGWIIDRLSGVHGILEKSFAEVDAIFQQVVDDRIKFLEISRNEENIVDVLLRMERDSSKFDAVKFTQDRVKALIMDIFLAGVETGENTIVWAMTEIVRNPRVMKRLQDEIRSYVKEDRVKESDLEKLQYLKMVIKEVLRLHPPVPLLLPRETMSQFKLNGYDIHSKTHLYVNAWAIGRDPECWTNPLEFFPERFMESNIDYKGQHFELIPFGAGRRICPGMNMGIITVELALANMLLCFNWKLLNGMKEEDVDMEEDTGLSASKKLPLQLLPIPYFSSDY 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37262806 37265183 - ClCG05G025960.1 Cla05g02603 274093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02603 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Cla05g02603 508 PANTHER CYTOCHROME P450 71B16-RELATED 5 503 - -
Cla05g02603 508 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 Pfam Cytochrome P450 37 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 Gene3D Cytochrome P450 22 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02603 508 PANTHER CYTOCHROME P450 71B11-RELATED 5 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02603 Cla-Chr5:37262806 Cla05g02608 Cla-Chr5:37303566 0 dispersed
Cla05g02605 Cla-Chr5:37278322 Cla05g02603 Cla-Chr5:37262806 4.06E-131 dispersed
Cla05g02602 Cla-Chr5:37249721 Cla05g02603 Cla-Chr5:37262806 6.11E-177 tandem
Cla05g02603 Cla-Chr5:37262806 Cla05g02604 Cla-Chr5:37275902 1.58E-102 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02603 - K01773 csv:116401644 762.681