Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02604 ATGATCATCTGGGCAATGGCAGAGCTTGTTAAGAATTCAAAAGTGATGAAGAAGCTACAAGATGAGATCAGAAGTTGCATAAAAGAAGATCGAGTGAAGGAAAGTGAGTTGGAAAAGCTTGGATATCTAAAAATGGTGGTAAAGGAGGTTTTAAGGCTTCATGCGCCACTCCCACTTCTCCTACCAAGAGAAACAATGTCACATTTTAAGCTGAATGGTTATGATATTCAACCCAAAACTCATGTTCATGTGAATGTATGGGCAATTGGACGAGACCCAGAAACTTGGACAAACCCACAAGAATTTTGTCCAGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAAAATTTTGAGTTAATACCATTTGGAGCTGGACGAAGGATATGTCCTGGTGTGAATATGGGGATTGCAACAGTAGAACTGGCATTGGCTAATATGTTGTTGTGCTTTGATTGGAAATTACCAAATGGAATGAAAGAAGAAGATGTAGACATGGATGAAGATTTTGGTATTACAGTTACCAAGAAATCACCTCTTCAACTTCTTCCAATTCCTTACTTCAAATCCTATTGA 579 37.82 MIIWAMAELVKNSKVMKKLQDEIRSCIKEDRVKESELEKLGYLKMVVKEVLRLHAPLPLLLPRETMSHFKLNGYDIQPKTHVHVNVWAIGRDPETWTNPQEFCPERFMESNIDYKGQNFELIPFGAGRRICPGVNMGIATVELALANMLLCFDWKLPNGMKEEDVDMDEDFGITVTKKSPLQLLPIPYFKSY 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37275902 37276480 - ClCG05G025965.1 Cla05g02604 274094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02604 192 SUPERFAMILY Cytochrome P450 2 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PRINTS E-class P450 group I signature 85 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PRINTS E-class P450 group I signature 131 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PRINTS E-class P450 group I signature 2 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PRINTS E-class P450 group I signature 121 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 Pfam Cytochrome P450 3 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PANTHER CYTOCHROME P450 71B11-RELATED 2 188 - -
Cla05g02604 192 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 124 133 IPR017972 GO:0005506|GO:0016705
Cla05g02604 192 PANTHER CYTOCHROME P450 71B16-RELATED 2 188 - -
Cla05g02604 192 PRINTS P450 superfamily signature 122 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PRINTS P450 superfamily signature 11 24 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02604 192 PRINTS P450 superfamily signature 45 56 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02604 Cla-Chr5:37275902 Cla05g02607 Cla-Chr5:37288721 3.15E-142 dispersed
Cla05g02603 Cla-Chr5:37262806 Cla05g02604 Cla-Chr5:37275902 1.58E-102 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02604 - K01773 csv:101204104 327.02