Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02607 ATGCATATCCTTTCCATCTGGGTCCTTTCTCTTCTCCTTCTCTTGTGTTCTCTGATATTGCTTCTTAAAACAAACAAGAATGTTGAAAAACACAAGAATAATAAGCTTAAAATTGTTCCTCCTCCTACCCCTCTAAAGCTTCCTTTGTTGGGTCATTTACACCTCATTGGCTCTCACCCCCATCGCTCCTTATGGAACCTTTTAAAAACACATGGCCCCATCATGCTCCTCAAATTCGGCTCGGTCCCCACCGTCGTGATCTCTTCAGCAGCCGTCGCACAAGAGTTGTTCAAAAAACACGACCTTGCTTCTTGCAGCCGCCCTCGCTTAGCCGCCACAGCAAGATATTCATACAACTACTTAGACTTGATTTTTTCCCCATATGGTATTCATTGGAGGGAGGTTCGAAAGATTTGTATTCTCGAGCTGTTTAGTGCCAAACGCGTGCAATCTTTTCAGCATATTAGAGAAGAAGAAGTGAATTTATTATTGAATTCCATCTCCCAATCCTCATCTTCTTCAACTTTAGTTGATTTGAAGGCAAAATCTTATTCTCTCACGGCTAATATATTGACCCGGATTGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATAATGAGAATTTCGAAGGGGTTATACAAAGAGCAAGCGCAGCATTGGGAAGCTTCTCGGCGAGTGATTTATTTCCTAGTTTCGGGTGGATTATTGATCGGCTTAACGGTGTTCATGAGCGACTGGAAAAAAGCTTTGCGGAGTTGGATGCTTTTTTAGAACATGTAATCAAGGATCGCATTGACTTTTGGAAGGCTTCTCAAAAGGAAGAAAATTTTGTTGATGTTTTGTTAAGAATGGAGAGAGATTGCCCAACCAAATTCACCCGAGATTGCATCAAGGCACTTGTCATGGATATATTTCTAGCTGGAGTGGAAACAGGGGCAAACATGATCATCTGGGCAATGGCAGAGCTTGTTAAGAATTCAAAAGTGATGAAGAAGCTACAAGATGAGATCAGAAGTTGCATAAAAGAAGATCGAGTGAAGGAAAGTGAGTTGGAAAAGCTTGGATATCTAAAAATGGTGGTAAAGGAGGTTTTAAGGCTTCATGCGCCACTCCCACTTCTCCTACCAAGAGAAACAATGTCACATTTTAAGCTGAATGGTTATGATATTCAACCCAAAACTCATGTTCATGTGAATGTATGGGCAATTGGACGAGACCCAGAAACTTGGACAAACCCACAAGAATTTTGTCCAGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAAAATTTTGAGTTAATACCATTTGGAGCTGGACGAAGGATATGTCCTGGTGTGAATATGGGGATTGCAACAGTAGAACTGGCATTGGCTAATATGTTGTTGTGCTTTGATTGGAAATTACCAAATGGAATGAAAGAAGAAGATGTAGACATGGATGAAGATTTTGGTATTACAGTTACCAAGAAATCACCTCTTCAACTTCTTCCAATTCCTTACTTCAAATCCTATTGA 1524 40.42 MHILSIWVLSLLLLLCSLILLLKTNKNVEKHKNNKLKIVPPPTPLKLPLLGHLHLIGSHPHRSLWNLLKTHGPIMLLKFGSVPTVVISSAAVAQELFKKHDLASCSRPRLAATARYSYNYLDLIFSPYGIHWREVRKICILELFSAKRVQSFQHIREEEVNLLLNSISQSSSSSTLVDLKAKSYSLTANILTRIAFGKSFRGSELDNENFEGVIQRASAALGSFSASDLFPSFGWIIDRLNGVHERLEKSFAELDAFLEHVIKDRIDFWKASQKEENFVDVLLRMERDCPTKFTRDCIKALVMDIFLAGVETGANMIIWAMAELVKNSKVMKKLQDEIRSCIKEDRVKESELEKLGYLKMVVKEVLRLHAPLPLLLPRETMSHFKLNGYDIQPKTHVHVNVWAIGRDPETWTNPQEFCPERFMESNIDYKGQNFELIPFGAGRRICPGVNMGIATVELALANMLLCFDWKLPNGMKEEDVDMDEDFGITVTKKSPLQLLPIPYFKSY 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37288721 37291113 - ClCG05G025975.1 Cla05g02607 274097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02607 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Cla05g02607 507 Pfam Cytochrome P450 41 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02607 507 PANTHER CYTOCHROME P450 71B16-RELATED 9 503 - -
Cla05g02607 507 PANTHER CYTOCHROME P450 71B11-RELATED 9 503 - -
Cla05g02607 507 SUPERFAMILY Cytochrome P450 41 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02604 Cla-Chr5:37275902 Cla05g02607 Cla-Chr5:37288721 3.15E-142 dispersed
Cla05g02607 Cla-Chr5:37288721 Cla05g02610 Cla-Chr5:37315144 0 dispersed
Cla05g02605 Cla-Chr5:37278322 Cla05g02607 Cla-Chr5:37288721 3.16E-146 proximal
Cla05g02607 Cla-Chr5:37288721 Cla05g02608 Cla-Chr5:37303566 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02607 - K01773 csv:101204104 738.028