Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02608 ATGGTTAGCCTTGATCAGATTATACATAGCATCGTTATCATGTGGCTTCCTCTAACAATGGTGCTATTATCTTCTCTACTGTTTCTTAAAACAAAGATGAAATTTGGAAGACACAATAACAAGAATGTTATTGTTCCTCCTCCAAGTCCACCAAAGCTTCCTTTCTTAGGTCATTTACACCTCATTACCTCTCTCCCCCATCGCTCTTTTTTTAACCTTTCAAAAAAATATGGCCCCGTCATCCTCCTCAAACTCGTCTCCATCCCGACCGTTGTAGTCTCCTCCGCCGATGCTGCAAAAGAGGTGCTAAAACTTCACGACCTTGCTTCTTGCAGCCGACCTCAATCCGCCGCTGGAGCAAGATTTTCATACAATTATCTAGACATTGGGTTAGCGCCATATGGTGACCATTGGAGGGAAGTTAGAAAAATTTGTGTGCTTGAGCTGTTCAGTGCTAGAAGAGTGCAATCATTTCAAATGATAAGAGAAGAAGAGATTGGTGTGCTGTTGAACTCCATTTCTCAATCTTCATCTTTTGCCACTCCAATTGATTTGAGTGAGAAATTGTACTCTCTCACTGCAAATATGATTACCCGAATTGCTTTTGGGAAGTGTTTTAGAGGAAGTGAGTTAGATAATGAGAATTTTCAAAAGGTTATCCGAAGAGCAGTTGCAGCAATAGGAAGCTTTGCAGCCATTGACTTCTTTCCTAAAGTGGGTTGGATTATTGATCGAATTAGTGGTGTTCATAGGAGATTGGAGAAGAGTTTTGCTGAGTTGGATGCTTTTCTTCAACATGTAGTTGATGATCGCATTAAATTTAGGGAGATTTCTCATAATTATGATGATAATCAAGAAAATATTGTTGATGTTTTGTTGAAAATGGAGAAGGATGGCTCTGAAGTTGATGCAGTGAAACTCACTAGAGATTGCATCAAAGCACTTGTCATGGATATATTTATAGCTGGAGTGGAAACAGGAGCAAACACACTTGTTTGGGCAATGACAGAGTTGGTAAAAAATCCAAAAGTGATGAAAAAGCTACAAGGTGAGATCAGAAGTTGCGTAAGAAAAAGTAAAGTAGTAAAAGAGAGGGACCTCGAAAATCTTGAATACCTAAAAGCCGTAGTGAAAGAAGTTCTAAGGTTGCATGCACCCGCCCCACTTCTGCTTCCAAGAGAAACCATGTCCCATTTTAAGCTAAATGGTTATGATATTAATCCAAAAACTCGTGTTCATGTCAACGTGTGGGCGATCGGACGAGACCCAAAATTATGGACTAACCCAGAAGCATTCTTGCCTGAGAGATTTATAGGGAGTGATATTGATTACAAAGGGCAGAATTTTGAGTTATTGCCATTTGGATCTGGTCGAAGAATTTGTCCTGGGATGAACATGGCAACCATTACAGTGGAGTTAGCATTGTCTAATATGTTATTGTGTTTTGATTGGAAATTACCAAATGGAATGAAAGAAGAAGATGTGGACATGGAAGAGGAACCTGGTATTGCAATTGCCAAGAAATCACCTCTTCACCTTCTTCCACTCCCTTACTTCAACTCCAAACAATAG 1572 39.69 MVSLDQIIHSIVIMWLPLTMVLLSSLLFLKTKMKFGRHNNKNVIVPPPSPPKLPFLGHLHLITSLPHRSFFNLSKKYGPVILLKLVSIPTVVVSSADAAKEVLKLHDLASCSRPQSAAGARFSYNYLDIGLAPYGDHWREVRKICVLELFSARRVQSFQMIREEEIGVLLNSISQSSSFATPIDLSEKLYSLTANMITRIAFGKCFRGSELDNENFQKVIRRAVAAIGSFAAIDFFPKVGWIIDRISGVHRRLEKSFAELDAFLQHVVDDRIKFREISHNYDDNQENIVDVLLKMEKDGSEVDAVKLTRDCIKALVMDIFIAGVETGANTLVWAMTELVKNPKVMKKLQGEIRSCVRKSKVVKERDLENLEYLKAVVKEVLRLHAPAPLLLPRETMSHFKLNGYDINPKTRVHVNVWAIGRDPKLWTNPEAFLPERFIGSDIDYKGQNFELLPFGSGRRICPGMNMATITVELALSNMLLCFDWKLPNGMKEEDVDMEEEPGIAIAKKSPLHLLPLPYFNSKQ 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37303566 37306340 - ClCG05G025978.1 Cla05g02608 274098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02608 523 PANTHER CYTOCHROME P450 71B11-RELATED 12 517 - -
Cla05g02608 523 Gene3D Cytochrome P450 32 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 Pfam Cytochrome P450 47 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 SUPERFAMILY Cytochrome P450 47 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02608 523 PANTHER CYTOCHROME P450 71B16-RELATED 12 517 - -
Cla05g02608 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02599 Cla-Chr5:37236335 Cla05g02608 Cla-Chr5:37303566 0 dispersed
Cla05g02601 Cla-Chr5:37242515 Cla05g02608 Cla-Chr5:37303566 0 dispersed
Cla05g02602 Cla-Chr5:37249721 Cla05g02608 Cla-Chr5:37303566 5.55E-156 dispersed
Cla05g02603 Cla-Chr5:37262806 Cla05g02608 Cla-Chr5:37303566 0 dispersed
Cla05g02608 Cla-Chr5:37303566 Cla05g02610 Cla-Chr5:37315144 0 dispersed
Cla06g01705 Cla-Chr6:30628085 Cla05g02608 Cla-Chr5:37303566 7.82E-135 dispersed
Cla05g02607 Cla-Chr5:37288721 Cla05g02608 Cla-Chr5:37303566 0 tandem
Cla05g02608 Cla-Chr5:37303566 Cla05g02609 Cla-Chr5:37313150 2.10E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02608 - - csv:101216707 785.408