Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02609 ATGAGGAAAATTTGTGTTCTTGAGCTTTTTAGTCTCAAGAGGCTCAAATCTTACGAACCCATTAGAGATCAAGAAGTGAATTCGCTTATGGAATCAATTTCGGAGCTGGCTTCTTGTGGTGCGGCTGTTGATCTTACTCAGAAATCAATGGCTCTCACTGCTGCTATTATTTTTAGGATTGCTTTTGGGAAGAAGGTGGTTGAAGGAGATGGATTTCATGAGCTTGTGAGTGAAGCTGAGGCTTTGTTGGGAAGTTATAGCGGTTATGAGTTGTTCCCTAATCTTATAGGGAAGGTTATTGATTGGTTTAGTGGACACCAAAGAAAGGTTTTGAAGGTTTTTAATGAGTTGGATGCTTTGTTTCAAGAGGTGATGGATGAACATCTTTGTGTTGAGAGAGATAAAACTGATCAGGAAGATGATATTATTGATGTGCTTTTGGGAATTAGCCAAAACCAACATCAACCGCCTTCCAATGTTTCCATTTCCCATCAACATATCAAAGGCCTTCTTTTGAACATATTTTTGGGAGGACTGGACACAAGTTCCATAACAATAGTATGGGCAATGGCAGAACTTGCAAAGAAACCAAAATTAATGAAGAAAGCTCAACAAGAAATCAGAAGTTACATCGGAAACAGAGGAAAAGTAAGAGAGAAAGACACAGAAGAGTTTCCATATCTAAAAATGATAGTGAAAGAAACCCTGAGATTGCATCCTCCAGCACCCCTTCTTCTTCCAAGACAAGTCATTTCCCATTTCCTAATGGATGGCTTTGATATTTACCCAAAAACAGTGGTTCAAGTCAATGCTTGGGCAATTGGACGAGACCCCAGATGCTGGAAACACCCACAACAATTCGTACCGGAGAGATTTATAGACAGCTCTGTTGATTACAGAGGACAGCATTTTGAGCTGCTGCCGTTTGGGGCTGGCCGGAGGATGTGTCCGGCGTTGAATATGGGGATCAGAATTGTGGAGTTCACTTTGGCGAATCTTTTGTACCATTTTGATTGGAAGTTGCCGGAGGGGATGAAGGAGGAGGATTTGGATATGGAAGAGATCTCTGGGTTTAGCCTCACCATTTACAAGAAGTTGCCTCTTCAACTCGTACCTGTTTCATACCATCCATGA 1134 41.45 MRKICVLELFSLKRLKSYEPIRDQEVNSLMESISELASCGAAVDLTQKSMALTAAIIFRIAFGKKVVEGDGFHELVSEAEALLGSYSGYELFPNLIGKVIDWFSGHQRKVLKVFNELDALFQEVMDEHLCVERDKTDQEDDIIDVLLGISQNQHQPPSNVSISHQHIKGLLLNIFLGGLDTSSITIVWAMAELAKKPKLMKKAQQEIRSYIGNRGKVREKDTEEFPYLKMIVKETLRLHPPAPLLLPRQVISHFLMDGFDIYPKTVVQVNAWAIGRDPRCWKHPQQFVPERFIDSSVDYRGQHFELLPFGAGRRMCPALNMGIRIVEFTLANLLYHFDWKLPEGMKEEDLDMEEISGFSLTIYKKLPLQLVPVSYHP 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37313150 37314736 + ClCG05G025980.1 Cla05g02609 274099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02609 377 Gene3D Cytochrome P450 1 375 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS E-class P450 group I signature 316 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS E-class P450 group I signature 270 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS E-class P450 group I signature 166 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS E-class P450 group I signature 52 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS E-class P450 group I signature 306 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS E-class P450 group I signature 186 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS P450 superfamily signature 177 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS P450 superfamily signature 307 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PRINTS P450 superfamily signature 230 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 Pfam Cytochrome P450 1 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 PANTHER CYTOCHROME P450 71B11-RELATED 1 374 - -
Cla05g02609 377 PANTHER CYTOCHROME P450 1 374 - -
Cla05g02609 377 SUPERFAMILY Cytochrome P450 1 372 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g02609 377 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 309 318 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02609 Cla-Chr5:37313150 Cla05g02611 Cla-Chr5:37322308 0 dispersed
Cla05g02608 Cla-Chr5:37303566 Cla05g02609 Cla-Chr5:37313150 2.10E-128 tandem
Cla05g02609 Cla-Chr5:37313150 Cla05g02610 Cla-Chr5:37315144 2.55E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02609 - K01773 csv:101216461 580.867