Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02636 ATGGATTCAAATTCAAAGAAATCCAACAAAATCAGAGACATCGTACGGCTTCAACAGATCCTGAAGAAATGGCGGAAGCTAGCGAACTCGTCGAAGACGGCCAACAAAATCTCCGGCACGGCGGCAGGACCTGCCGGAAAGAGCATAAAGTTTCTGAAACGGACGTTATCATCGGCCGGTGGGGAAAGCTGCGGCGGCGCAGTACCAAAAGGCTATTTGGCGGTGAGCGTGGGGGAGGAGCAAAAGCGATTTGTGATACCGACGCAGTATTTAGGGCATCCGGCTTTTGAGATTCTGTTAAGAGAAGCGGAGGAGGAGTTCGGATTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAAAAGAAGAAAGGGGACTTGTTGTTAGGGGGAGAAGAGGTTTTGAGTTTTTGTTCATTGGAAACGCTGCAGTTAACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG 510 50.0 MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGGESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR 169
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 37570802 37571311 + ClCG05G026300.1 Cla05g02636 274126
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02636 169 Pfam Auxin responsive protein 23 130 IPR003676 GO:0009733
Cla05g02636 169 PANTHER SAUR FAMILY PROTEIN 7 169 - -
Cla05g02636 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 169 IPR003676 GO:0009733
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00382 Cla-Chr2:3705062 Cla05g02636 Cla-Chr5:37570802 8.02E-11 dispersed
Cla05g00058 Cla-Chr5:643115 Cla05g02636 Cla-Chr5:37570802 1.84E-20 dispersed
Cla05g02636 Cla-Chr5:37570802 Cla09g00158 Cla-Chr9:1639142 8.50E-42 dispersed
Cla10g00287 Cla-Chr10:3787997 Cla05g02636 Cla-Chr5:37570802 1.14E-12 dispersed
Cla05g02636 Cla-Chr5:37570802 Cla02g00471 Cla-Chr2:4562111 9.43E-25 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02636 K14488 - csv:101216710 273.092