Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02654 ATGGCGCCCTCCTTTGATTGGTGGGGAAAAGACAGTCATAGAGGAACCCCTGTTGTTGTCAAGATGGAGAATCCTAATTGGTCGATGGTTGAGTTGGAGGGTCCGTCGGAGGATGATTTTCTCATCGCTGGTGAGTCGTCGCCGACGGGTCGGACCAGAGATAAAGGCAGAGGCAAAAACGCTAAGCAACTCACGTGGGTTCTCCTCCTCAAAGCCCACAGGGCCGCTGGTTGTTTAACTTCCATTGGCTCTGCAATGGTGGACCTCGCCGCCGCCGTTAGACGCCGTGTTGCTTCTGGACGGACTGATGAGGACGACGCCGACAATGACGTCACTGTTGGAGGTAGAGAGAAAGAGAACCCGACTGTGAAAACCAGGTTCTATTCTTGTATCAAGGTGTTTCTATGGCTGTCGGTGCTTCTGTTGGGTTTTGAGATTGCGGCCTTCTTCAAGGGCTGGCATTTTGGTACTCCAAATCTTCAATTGGATTACCTTTGGGCATCGCCTTGGGGTTTCAAAGGAGCTTTTGGTTGGATTTACTCTCAGTGGGTATTGATTCGAGTGGACTATTTAGCTCCACCTCTACAGTTCTTAGCCAATGCCTGTATCATACTGTTCATCATTCAGAGCTTGGATCGTTTAATCTTATGTTTGGGTTGTTTCTGGATCCGGTTCAAGAAAATCCAACCAGTTCTTAAACCTGGAGATGAAGACCTTGAATCTGGTGAAAAGGGCTATTTCCCAATGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTATCTGCAACTTGGACTGGCCAAGAACTAAGCTGCTGATTCAAGTTCTTGATGATTCTGATGATCCAACTACCCAGTTGTTGATTAAAGAGGAGGTTCTTAAATGGCAGCAAGAGGGTGCCAACATTATTTATCGTCATCGGGTCATTAGAGATGGTTATAAGGCTGGCAACCTCAAATCCGCCATGAATTGTAGCTATGTCAAAGAATACGAATTCGTTGCCATTTTCGATGCCGATTTTCAACCCACACCTGATTTCCTTAAAAGAACTGTTCCGCATTTCAAGGACAATGAAGAGCTGGGGCTGGTTCAAGCTAGGTGGTCTTTTGTGAACAGGGATGAGAACTTGCTAACTAGGCTGCAGAACATCAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTGAACAGTGTCTTCCTCAACTTCTTTGGATTCAATGGCACTGCTGGTGTGTGGAGGATCAAAGCTCTCGAGGATGCCGGTGGGTGGTTAGAAAGGACCACCGTCGAGGACATGGATATCGCTGTTCGTGCTCATCTTCATGGATGGAAATTCATATTCCTAAATGATGTTGAGTGCCAGTGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACATAGATGGCATTCTGGCCCAATGCAATTGTTTCGCCTTTGTTTGCCTGCTATTATTCGATCAAAGATTAGTGTATGGAAGAAGTTCAACTTGATCTTCCTCTTCTTTTTGCTCAGAAAATTGATACTGCCCTTCTATTCCTTCACACTTTTCTGCATAATTCTACCTATGACAATGTTTGTTCCCGAGGCCGAGCTACCCGCTTGGGTCGTTTGCTATATCCCGGCCACCATGTCATTTCTAAACATCCTGCCTGCCCCAAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTTGAGAACACCATGTCAGTCACCAAGTTCAATGCCATGATCTCAGGCCTCTTCCAGCTTGGTAGTGCCTACGAATGGGTTGTTACAAAGAAATCTGGCCGTTCCTCGGAGGGTGATCTCGTCTCCTTGGTAGAGAGAGAGCAAAAGCATCAGAGAGGAGCTTCAGCGCCCGACCTAGAAGAAATGAAGGAAGAAATTCAGAAGCAAGAGAAGAAAGCTTCTTTGCGAAAGAAGCACAACAGAATATACACGAAAGAGCTGGCATTAGCTTTCCTCCTCCTAACCGCATCGGCACGGAGCCTTCTGTCTGCACAAGGGATCCATTTCTACTTCTTGCTATTCCAGGGGATCTCGTTCCTGCTTGTCGGTTTGGACTTGATTGGCGAACAGATAGGTTGA 2124 46.14 MAPSFDWWGKDSHRGTPVVVKMENPNWSMVELEGPSEDDFLIAGESSPTGRTRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIGSAMVDLAAAVRRRVASGRTDEDDADNDVTVGGREKENPTVKTRFYSCIKVFLWLSVLLLGFEIAAFFKGWHFGTPNLQLDYLWASPWGFKGAFGWIYSQWVLIRVDYLAPPLQFLANACIILFIIQSLDRLILCLGCFWIRFKKIQPVLKPGDEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTKLLIQVLDDSDDPTTQLLIKEEVLKWQQEGANIIYRHRVIRDGYKAGNLKSAMNCSYVKEYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNRDENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEREQKHQRGASAPDLEEMKEEIQKQEKKASLRKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37746983 37750178 + ClCG05G026500.1 Cla05g02654 274144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02654 707 Coils Coil 634 654 - -
Cla05g02654 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 240 465 IPR029044 -
Cla05g02654 707 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 527 IPR029044 -
Cla05g02654 707 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 706 - -
Cla05g02654 707 MobiDBLite consensus disorder prediction 39 58 - -
Cla05g02654 707 PANTHER - 6 706 - -
Cla05g02654 707 Pfam Glycosyl transferase family group 2 342 538 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02654 Cla-Chr5:37746983 Cla08g01643 Cla-Chr8:29051703 0 dispersed
Cla05g02645 Cla-Chr5:37663840 Cla05g02654 Cla-Chr5:37746983 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02654 - - csv:101204215 1364.36