Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g02666 TACGAATACTTGGAAGTAAAGGGAGCCATTTTTGTTACTTCTCCCATGGCCACTCCCCTTTTCCGGTCGTCGGTTTTCTTGGCTGTGGTCTTCTCCGCCTCCGCCTCCGCCTCATCCTGGACAGTCAAATATCTGCCTGGATTCTCAGGTCCTCTTCCGTTTGAACTTGAAACTGGGTATGTGGGAGTGGGGGATTCGGAGGAAGTTCAGTTGTTTTATTACTTTGTCAAATCCCAAGGAAATCCCCAAACCGATCCTCTAATGACTTGGTTGGCCGGCGGCCCTGGTTGCTCTGCTTTCTCTGGTCTCGCCTTTGAAATTGGTCCTATAAATTTCAAGGTAGAGCCATACAATGGAACCGTACCTCAACTAATCTTGAATCCTGATGCATGGACTAAGAAAGCTAGTATTCTATTTATAGATTCGCCTGTTGGCACTGGATTTTCATATAGTCGAACTCTACGAGGCTCCAAAAGAGGAGATTTTTTACAAGTAGAACAAATTCATCAATTTTTAAGGAAGTGGCTTGCAAACCACCCAGAATTTATATCTAATCCATTTTACGTTGGTGGAGACTCTTACTCTGGTATGATTGTTCCACCTGTTACTCAAGCAATCTCAGAAGGAAACAAACACGAAGTCCCACTTATAAACCTCCAGGGATACATCGTGGGAAATCCAGTCAGCGTACGTAAAACAAATGATAATTCTAGGATTCCTTATGCTTATAGATTGACGCTCATCTCTACAGAATTGTATGAGTCATTAACAAATAGTTGCAAAGGAGAATATGAAAATGTTGATCCAAATAACGAGGAGTGCGTCAATCATGTATCAAACTTCAAAAAGTGTGTGGGTAGAATCAATTATTGGTGTATTTCTTGCCCTTATTGTGAGGATGTATCTTCGGCGCCACAAGATAAGTTTGGACGGCGAAGATCTCTCTACAACACCTCCCAGGAACTGCTTCTTGCTACCAGAGTGTTACCTCCTCCTTCTCTTGACTGTCAAGAGTATAAGTACTACCTTAGTTACTATTGGGCAAACGATGACCAAGTTCGAAAAGCACTTCACATACGTGAGGGAACTATTGAAGAATGGATAAGATGCCAGAATCGTAAAAGTTACGAATATGATATTATGAGTGTTGTTCCTTATCATGCGAATCTTAGTTTTAAAGGTTATCGATCTTTGGTTTTTAGTGGGGATCATGATCTGATGGTGCCAGTCATAGACACTGAAGCATGGTTAAGGTCGCTAAGTTATCCTATTGGTGGAGGGCACACACCAGAATTCATGCAAACTCAAAGTCGCCTCTTCTCCGCCGCTGCCGCCACCGGAGGATCATACTCGAGGGTGAAGTATCTGCCGGGATTCTCAGGACCTCTTCCCTTCCAACTAGAAACTGGATACGTTGGTGTGGGAGATTCAGATCAATTTCAGATTTTTCACTATTTTATCAAATCTGAAGCAAATCCCAAAACGGATCCTCTCATTATTTGGCTTACCGGAGGTCCCGGTTGCTCTGCCCTCTCCGGACTTGCCTTTGAAATTGGTCCTATAAGTTTTGATGAAGAATCAAACGAAGGGAGCATTCCTCGATTAATCTTAAATCCCTATTCATGGACGAAGAAATGTAGCATAATATTTGTAGATTTACCTGCGGGGACTGGATTTTCATATGATACAACTTCGTCTACCTTTAAACCGGGAGATTTTAATCAAATTCACCACTATCTTCAATTCTTGAGAAAGTGGTTTGTTGATCATCCAGAGTTTACAACAAATCCATTCTATATTGGTGGAGATTCATACTCTGGGATGATTGTTCCGGGCTATATATTGGGAAATCCTTACACTATTCGTGATTCAGGTGACAATTTTGCAATTTCTTTTGCTCATAGGATGACTCTTATATCTGATGAATTATTTGAGTCATTGAAAACTAGTTGTAAAGGAAAATATGTGAACATTGATCCAAGCAATGTGGAGTGTTTAAGACATTACGAGACGTATAAAAAGTGTATATCGAAAGTCGAGCCTGCAAATATTTTGGATCCGAAGTGTCAATTTCAGTCTCCAAAGCAACAAGATGTACATGATCGAAGATCTCTCAATAGCATCTCAAAGTCGTTGTTTGATCAAAGCACACCACTCTCCTTTCGTAGTAGTTGTCCTGAGTTTAAATACAAACTTTCTAATGATTGGGCTAACGCGGAACAAGTTCGGAAGGCACTTCACATTCGTGAGGGAAGTATTGGAGAATGGATAAGATGTAAGAACAAAAAAGAAATGTATAATTTTGAACTCGATACTGTTTTCCCTTATCATGTGAACCTTAGTTCTAAAGGATATCGATCTTTGATCTATAGTGGCGATCATGATATGTTAGTGCCCCATTTGGACACTCAGGCATGGATCAAAGCTTTAAACTACTCCATTGTTGATGATTGGAGACCATGGTTTATCTTGGATCAAGTAGCCGGATATACCCGATACTATGCAAATAAGATAACATTTGCAACTATAAAAGGTGGAGGGCACACAGCAGAATACACAAAAAGAGAATGCAGCATAATGTTTAGCAGATGGATATCAGGACAATCCTTATGA 2613 40.6 YEYLEVKGAIFVTSPMATPLFRSSVFLAVVFSASASASSWTVKYLPGFSGPLPFELETGYVGVGDSEEVQLFYYFVKSQGNPQTDPLMTWLAGGPGCSAFSGLAFEIGPINFKVEPYNGTVPQLILNPDAWTKKASILFIDSPVGTGFSYSRTLRGSKRGDFLQVEQIHQFLRKWLANHPEFISNPFYVGGDSYSGMIVPPVTQAISEGNKHEVPLINLQGYIVGNPVSVRKTNDNSRIPYAYRLTLISTELYESLTNSCKGEYENVDPNNEECVNHVSNFKKCVGRINYWCISCPYCEDVSSAPQDKFGRRRSLYNTSQELLLATRVLPPPSLDCQEYKYYLSYYWANDDQVRKALHIREGTIEEWIRCQNRKSYEYDIMSVVPYHANLSFKGYRSLVFSGDHDLMVPVIDTEAWLRSLSYPIGGGHTPEFMQTQSRLFSAAAATGGSYSRVKYLPGFSGPLPFQLETGYVGVGDSDQFQIFHYFIKSEANPKTDPLIIWLTGGPGCSALSGLAFEIGPISFDEESNEGSIPRLILNPYSWTKKCSIIFVDLPAGTGFSYDTTSSTFKPGDFNQIHHYLQFLRKWFVDHPEFTTNPFYIGGDSYSGMIVPGYILGNPYTIRDSGDNFAISFAHRMTLISDELFESLKTSCKGKYVNIDPSNVECLRHYETYKKCISKVEPANILDPKCQFQSPKQQDVHDRRSLNSISKSLFDQSTPLSFRSSCPEFKYKLSNDWANAEQVRKALHIREGSIGEWIRCKNKKEMYNFELDTVFPYHVNLSSKGYRSLIYSGDHDMLVPHLDTQAWIKALNYSIVDDWRPWFILDQVAGYTRYYANKITFATIKGGGHTAEYTKRECSIMFSRWISGQSL 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37847105 37856688 + ClCG05G026630.1 Cla05g02666 274156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g02666 870 Gene3D alpha/beta hydrolase 46 452 IPR029058 -
Cla05g02666 870 SUPERFAMILY alpha/beta-Hydrolases 42 429 IPR029058 -
Cla05g02666 870 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 30 426 - -
Cla05g02666 870 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 449 868 - -
Cla05g02666 870 Gene3D alpha/beta hydrolase 453 700 IPR029058 -
Cla05g02666 870 Gene3D - 724 870 - -
Cla05g02666 870 Pfam Serine carboxypeptidase 612 867 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 Pfam Serine carboxypeptidase 457 611 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 Pfam Serine carboxypeptidase 46 435 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 449 868 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 PRINTS Carboxypeptidase C serine protease (S10) family signature 551 561 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 PRINTS Carboxypeptidase C serine protease (S10) family signature 538 550 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 PRINTS Carboxypeptidase C serine protease (S10) family signature 586 611 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 PRINTS Carboxypeptidase C serine protease (S10) family signature 838 851 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 426 IPR001563 GO:0004185|GO:0006508
Cla05g02666 870 SUPERFAMILY alpha/beta-Hydrolases 453 869 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00345 Cla-Chr4:12116642 Cla05g02666 Cla-Chr5:37847105 3.10E-155 dispersed
Cla05g02115 Cla-Chr5:32729523 Cla05g02666 Cla-Chr5:37847105 7.03E-87 dispersed
Cla05g02116 Cla-Chr5:32762058 Cla05g02666 Cla-Chr5:37847105 1.55E-09 dispersed
Cla05g02666 Cla-Chr5:37847105 Cla09g00737 Cla-Chr9:7256664 1.52E-83 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g02666 K16296 - mnt:21387510 837.41