Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g02699 | ATGGATCAATTTTCCAAAGACCTCGACAAGGAAATCTGCAACGCGGAAAAATTTGAGAGAGAAGAAGAAGACGACGACGGCGACGAGGAGCAAGAAGAGGGACAAGACGACTGGGACGATTGGAATGCAGACGAGGAAGAAGGAGAAGAAGCATTTGATTCGAATTTTCTGTGTCTGTTCTGCAACTCAAAGTATAATCACTGCGACACTCTGTTCAACCATTGCAACTCCGTCCACTATTTCGATTTTCACAGCATCAGAAGGGCTCTGGGTTTAGACTTCTATGGTTCCTTCAAAATTATCAACTACATACGATCTCAGGTAGCAGATAATAGGTGCTGGAGCTGTGGTCTCTCGTGTAAATCAAACCAGGATTTACAGAACCATTTACACAAAATTTTAAATCTCGATGACATAAAGGCTCTTTGGGATGATGATAAATATCTAAAACCCTTCAGGCAAGATGATCCCCTCCTGTACAGTTTTACAGAAGACGAGGAGGATGATGATGAAATGACTAGAGAAAATCTTCCATTTCATCCAAACCAAAACAAAGAAAATGGAGTGGAAGATTGTAGTTCTACTTCACATGGTTATTTGAATGCTCCAAGCAACTTAGAGGGCGAGATTGAGAATACTGTGAAAACCACGGAGACTTTGGGGTTGAAAGATGAGAAGCAGGAAGACATTCAATTTAAATTAGCCAGACGGAATTTTGATAGAAAGGATATAAAAAATGCAAATGAAAGTTACTTCGGTTCATATAGCTCTTTTGGCATACACAAAGAGATGTTAAGCGACAAGGTGCTATATTACCTCTCTGTCAGAATGGAAGCTTATATGGAGGCGATTTTGCAAAATCCATCTCTGTTCCACAATGCTGCTGTGATGGATGTAGGCTGTGGAACAGGCATACTTAGTCTTTTTGCTGCAAAAGCAGGTGCATCAAGAGTTATTGCAGTTGAAGCGAGTGAAAAGATGGCAGCAGTGGCCACCCAAATTGCAAAAGACAATGGCCTCTGGTGGAACAGGAAACAAACTAGAGATTGTGACATGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTCGATAAGAACTTAGAGATTGCGCCTCACAGTGTTGATGTATTATTGAGTGAATGGATGGGCTATTGCTTGTTGTACGAATCAATGCTCAGCTCAGTACTCTTTGCAAGGGATCGGTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACAGCCACAATTCTTGTTGCTGGATTTGGAGTTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTTAGAATGTCTTGTGTAGGGAAGGAACTTGTAAAAGATGCTGCCAACACTCCCATCGTTGATATTGTGGATGCTAATGATTTAGTAACTAGTCCTGCAATCCTCCATACTTTCGATCTAGCAACCATGCATCCTGATGAAGTAGACTTCACTGCAAGTACCGAGTTGGAACCAAATTCACATGATCCTTCAAACTCAAATAGTGTTGAAGTTGAAGCATCTCGCTGTCATGGAGTTGTCCTATGGTTTGAAACTGGTTTTACAAGCAGATTTTGCAAGGAATCACCGGCTGTTCTGTCTACATCTCCATACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCAGAGAGCCGGTTGCTATAACATCTAGAAAGTCAAGAACCAACATATCAGCACCAGTAGGTAGCCATGCCTGCCCTGCTGTCAAAGTTCATTTGCGTCTTAGCATTGCCCGTGCGCCTGAACATCGAAGCATTGACATTTCACTAGAGACTACTGGGATCGCTGGTGATGGTAGGAAGCACCACTGGCCTGTACAGCTGTTCACACTAAGATAG | 1884 | 42.36 | MDQFSKDLDKEICNAEKFEREEEDDDGDEEQEEGQDDWDDWNADEEEGEEAFDSNFLCLFCNSKYNHCDTLFNHCNSVHYFDFHSIRRALGLDFYGSFKIINYIRSQVADNRCWSCGLSCKSNQDLQNHLHKILNLDDIKALWDDDKYLKPFRQDDPLLYSFTEDEEDDDEMTRENLPFHPNQNKENGVEDCSSTSHGYLNAPSNLEGEIENTVKTTETLGLKDEKQEDIQFKLARRNFDRKDIKNANESYFGSYSSFGIHKEMLSDKVLYYLSVRMEAYMEAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVIAVEASEKMAAVATQIAKDNGLWWNRKQTRDCDMSSGTIEVVHGMVEELDKNLEIAPHSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGVGGTSLPFWENVYGFRMSCVGKELVKDAANTPIVDIVDANDLVTSPAILHTFDLATMHPDEVDFTASTELEPNSHDPSNSNSVEVEASRCHGVVLWFETGFTSRFCKESPAVLSTSPYTPKTHWSQTILTFREPVAITSRKSRTNISAPVGSHACPAVKVHLRLSIARAPEHRSIDISLETTGIAGDGRKHHWPVQLFTLR | 627 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 38258671 | 38263343 | + | ClCG05G026980.2 | Cla05g02699 | 274189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g02699 | 627 | CDD | AdoMet_MTases | 296 | 414 | - | - | |
Cla05g02699 | 627 | Pfam | C2H2 type zinc-finger (2 copies) | 58 | 132 | IPR041661 | - | |
Cla05g02699 | 627 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 248 | 585 | IPR025799 | GO:0016274|GO:0018216 | |
Cla05g02699 | 627 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 27 | 625 | IPR025799 | GO:0016274|GO:0018216 | |
Cla05g02699 | 627 | Coils | Coil | 1 | 21 | - | - | |
Cla05g02699 | 627 | Gene3D | Vaccinia Virus protein VP39 | 240 | 415 | IPR029063 | - | |
Cla05g02699 | 627 | Gene3D | - | 418 | 618 | - | - | |
Cla05g02699 | 627 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 58 | 79 | IPR013087 | - | |
Cla05g02699 | 627 | MobiDBLite | consensus disorder prediction | 18 | 41 | - | - | |
Cla05g02699 | 627 | Pfam | Methyltransferase domain | 296 | 411 | IPR041698 | - | |
Cla05g02699 | 627 | SUPERFAMILY | beta-beta-alpha zinc fingers | 34 | 173 | IPR036236 | - | |
Cla05g02699 | 627 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cla05g02699 | 627 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED | 27 | 625 | - | - | |
Cla05g02699 | 627 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 254 | 565 | IPR029063 | - | |
Cla05g02699 | 627 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01517 | Cla-Chr3:30773098 | Cla05g02699 | Cla-Chr5:38258671 | 1.35E-63 | dispersed | |
Cla05g02699 | Cla-Chr5:38258671 | Cla06g01076 | Cla-Chr6:23366813 | 7.18E-35 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g02699 | K11436 | - | csv:101215999 | 1043.49 |