Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00045 AGATTATGGAGCATACCTTACTTTTATGTTAGAGGGCAAAATTTGTGTGGAGAAAGCATTGGTCTCGTCTGTATTGGATTTTGCATCCCACCATTTATATATGAAAGAGCGGATTGCATCATGTCTAATGTTGAGGGGGTACATGGGTGGGCTAAGCCGAGGTCGTTGCGCGCTCCCGCATCGGTCCCAACATCCATCGGTACGCCCCGTTGCCCTCTCCCTTCACTCCCAACCAGCATTCACCTCTTTCTTCCTCAGATCTACACTCTCCATCGCCCTCACTCTCAGTTGAAGATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTGAGTTTGAATTAGAACAGGGAAACTGGAGAGTGGAAATAGCGATCAGATTGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCAGGAGAGAGAATACAACAAACAAAAGAGTTGCTTGCTTCTTGTGAAAGCATTGAATGGCAGGAAGGTGGACGAGTTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATGATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACTGCTAGAACACAGGTTGGAAATGTTAAGAAAGTAGTAGGAGCTGGGAAGGAGCAAACGGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGACAGATCAAACTTATATACAGCCAACCAAGCAAATGATGACTTCATCACATCCGAATCAGATAGACAGCTGCTTCTAATAAAGCAGCAGGACGAGGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACATGAAGAGCTCCTTGCACAGGATAAAATTATCGACGACCTAGGAATGGAAATGGACAAAAAAAGTAGCAGTGGTCATGAAGAAGGCCAGCGCCAAGGGGCAGATAATGATGATATTGTTCTTGGTGGCTCTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAGCCTTTTGTCGGCAAAAGCCAGGCCCCATCCAGCCATACTCACATCAGAAAACGGATTCAGATAATTAG 1125 45.24 RLWSIPYFYVRGQNLCGESIGLVCIGFCIPPFIYERADCIMSNVEGVHGWAKPRSLRAPASVPTSIGTPRCPLPSLPTSIHLFLPQIYTLHRPHSQLKMPSAQDPFYVVKDEIQESEFELEQGNWRVEIAIRLINCNPAFTNGKGYLLIQEREYNKQKSCLLLVKALNGRKVDELDKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQVGNVKKVVGAGKEQTGTASASGMRRELMRLPNAHETDRSNLYTANQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQDKIIDDLGMEMDKKSSSGHEEGQRQGADNDDIVLGGSVHHPFCVGVPHLAFCRQKPGPIQPYSHQKTDSDN 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 487559 492966 - ClCG06G000520.1 Cla06g00045 274237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00045 374 PANTHER SYNTAXIN PROTEIN 167 318 - -
Cla06g00045 374 CDD SNARE_Qc 272 316 - -
Cla06g00045 374 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 269 315 IPR000727 -
Cla06g00045 374 MobiDBLite consensus disorder prediction 315 330 - -
Cla06g00045 374 SUPERFAMILY t-snare proteins 103 215 IPR010989 GO:0016020|GO:0016192
Cla06g00045 374 SUPERFAMILY SNARE fusion complex 268 317 - -
Cla06g00045 374 Gene3D - 271 327 - -
Cla06g00045 374 MobiDBLite consensus disorder prediction 315 335 - -
Cla06g00045 374 Pfam Syntaxin 6, N-terminal 104 214 IPR015260 GO:0016020|GO:0048193
Cla06g00045 374 Gene3D - 100 219 - -
Cla06g00045 374 PANTHER SYNTAXIN 167 318 IPR045242 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00045 K08500 - csv:101212527 291.967