Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00065 ATGTACACGGCGGTGCTCGCGGCGGTGCTGACGGTGGCGGTTTGGGTTTTGAAGAATGCAAACCATTGGGTCTACGAAACCGCTCGGTTGGGTTTGAAACGGTTCGCCCTACCGCCTGGGGATCTTGGCTGGCCGTTCATTGGCAATATGTGGTCTTTTCTAAGAGCTTTCAAGTCCCCTTATCCTGATTCTTTCATGGACTCATTCTTCTCCAGGTATGGAAATACAGGAATGTACAAAGCCTTCATGTTTGGAAGTCCAAGTGTGATAGTAACTTCAGCAGAAGCATGTAAAAGAGTTTTGAATGATGATGAAGCTTTTGGGTCAGGATGGCCTCTTTCCACCATGAAACTCATAGGAGAAAAATCCTTCATTGGCATTTCATACCAAGAACACAAGCGGCTCCGCCGCATAACCGCTGCTCCGGTCAATGGTTACGACGCCTTGGCCACCTACCTCACTTACATAGAAAAGATTGTGGTTTCTTCCTTAGAGAAATGGGCTTCCATGGGACAAATAGAGTTCTTAACACACCTTAGAAAGCTTACCTTCAAGATCATTATGTACATATTCCTTAGCTCTGAGACTGAGGCAATAATGGAGGCTTTGGAAAGAGAGTACACAGAGCTCAATCATGGAGTCAGAGCTATGGCCATCAATATTCCTGGTTTTGCTTACTATAAAGCACTCAAGGCACGAAAAAATCTCGTGGCAACATTTGGATCAATTGTGAGGGGGAGGAGGAAGGAAAGAGAGAGGAAGAATAATTTGAGAACAAAGAGGAGAGATATGATGGATGCTTTGCTAGATGCAGAAGATGAAGATGGAAGAAGGTTGAGTGATGAAGAAATTATTGATATTTTGATAATGTATTTGAATGCAGGCCATGAATCTTCAGGTCACACTATGATGTGGGCAACCATTTTCTTACAACAACATCCTCAATTTCTTCAAAAGGCCAAGGCAGAGCAAGAAGAGATAGTAAAAAAACGACCTCCTGGGCAAAAAGGTTTAACTCTCAAGGAAGTTCGAGAAATGACCTATCTTTCAAAGGTGATCGATGAAACACTCCGAGTGGTAACATTCTCACTCACGGTCTTTCGAGAGGCAAAGCATGATGTCAAAATTAGTGGCTATACCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTTAGAAGTGTTCACCACGATCCCGAAACCTATCCGAACCCGAAAGAATTTAATCCTTCAAGATGGGATGATTTCACACCAAAAGCAGGAAGCTTTCTTCCATTTGGAGCAGGAAGTAGATTGTGCCCTGGAAACGATCTTGCAAAACTAGAAATCTCAATCTTTCTCCACTATTTTCTCCTCAGTTATAAGATGGAAAGGGTTAATCCAAAAAGTCCAGTGAGGTATCTACCACATTCAAGGCCTAAAGATAACTGTTTGGCAAGGATCAAGAGACTTGATTGA 1455 42.75 MYTAVLAAVLTVAVWVLKNANHWVYETARLGLKRFALPPGDLGWPFIGNMWSFLRAFKSPYPDSFMDSFFSRYGNTGMYKAFMFGSPSVIVTSAEACKRVLNDDEAFGSGWPLSTMKLIGEKSFIGISYQEHKRLRRITAAPVNGYDALATYLTYIEKIVVSSLEKWASMGQIEFLTHLRKLTFKIIMYIFLSSETEAIMEALEREYTELNHGVRAMAINIPGFAYYKALKARKNLVATFGSIVRGRRKERERKNNLRTKRRDMMDALLDAEDEDGRRLSDEEIIDILIMYLNAGHESSGHTMMWATIFLQQHPQFLQKAKAEQEEIVKKRPPGQKGLTLKEVREMTYLSKVIDETLRVVTFSLTVFREAKHDVKISGYTIPKGWKVLVWFRSVHHDPETYPNPKEFNPSRWDDFTPKAGSFLPFGAGSRLCPGNDLAKLEISIFLHYFLLSYKMERVNPKSPVRYLPHSRPKDNCLARIKRLD 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 691037 700881 - ClCG06G000730.2 Cla06g00065 274257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00065 484 Coils Coil 254 274 - -
Cla06g00065 484 Pfam Cytochrome P450 38 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PANTHER ENT-KAURENOIC ACID OXIDASE 2 10 473 - -
Cla06g00065 484 Gene3D Cytochrome P450 28 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PANTHER CYTOCHROME P450 26 10 473 - -
Cla06g00065 484 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00065 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Cla06g00065 484 SUPERFAMILY Cytochrome P450 31 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02397 Cla-Chr1:37580054 Cla06g00065 Cla-Chr6:691037 8.79E-25 dispersed
Cla06g00065 Cla-Chr6:691037 Cla09g01156 Cla-Chr9:13561294 4.60E-173 dispersed
Cla05g00280 Cla-Chr5:2526050 Cla06g00065 Cla-Chr6:691037 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00065 K04123 - csv:101220640 860.907