Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00094 ATGATGATGAGAGAGAGAAGAAGTTGTGTTGTTGTATCCCTTGTGGGTATAGCATTATTGATGAGTTTATCCATTGTGAGAGGTGAAAATACATTACAATCACCAGTTAAGCTGGTATGGCATTACTACAAGCTCAACGCAACTTGCCCTTATGCTGAGGAATACATAAAGCATCAAGTCAAGTTGTTTTGGGACAAGGATAAGAGCATTGCTGCCAAGTTCCTTCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAACGGTTGTGACGGCTCAATACTTCTTGACGGTCCAAATTCAGAGAAAAATGCACCACAAAACCAAGGCCTTGGAGGGTTTGAAGAGATTGACAAGATCAAAATTGTACTCGAAGAAAGATGTCCGGGTGTTGTTTCTTGTACAGACATTTTAAACCTAGCCACTAGAGATGCTGCCCATTTGGCAGGTGCACCATCTTATCCAGTTTTTACTGGGAGGAGGGATGGTTTTACAAGTAGTATTGATGCAGTGGATTTACCATCTCCCTCCATATCATGGCAAGAAGGACTTAATTATTTTCAATCTAAAGGTCTTGATGTTTTGGACATGACAACACTCCTAGGTGCACATTCAATGGGAAAAACACACTGTCGATACATCATGGATAGGCTATACAATTTCAAAGGCACAAAAAAACCCGATCCATCAATGGACAAATCATTGTTAAAACAGCTTCAAAAGAAATGCCCCAAAAATTCAAAAACAGACCCAACAGTGAATCTAACACCAAAATCTGGAAATGACTATCAATTCACAAGTCTTTACTACTCGAGAATTCTTTCGAAAAAGGCGGTCCTCGGTCTCGATCAACAGCTTCTTTTCGGTAACGACACAAATGAAATTGTCCAGGAATTTGCTCCAGAATCTGGATTTGAAGACTTTCGTCGGTCCTTTGCTTTGTCTATGAGTAGGATGGGAAATATCAAGGTTTTGACTGGAAAAGATGGCGAGATTCGACGACATTGTCGCCGAAGAAACTAG 1017 40.61 MMMRERRSCVVVSLVGIALLMSLSIVRGENTLQSPVKLVWHYYKLNATCPYAEEYIKHQVKLFWDKDKSIAAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNQGLGGFEEIDKIKIVLEERCPGVVSCTDILNLATRDAAHLAGAPSYPVFTGRRDGFTSSIDAVDLPSPSISWQEGLNYFQSKGLDVLDMTTLLGAHSMGKTHCRYIMDRLYNFKGTKKPDPSMDKSLLKQLQKKCPKNSKTDPTVNLTPKSGNDYQFTSLYYSRILSKKAVLGLDQQLLFGNDTNEIVQEFAPESGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRHCRRRN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 994499 998899 + ClCG06G001020.2 Cla06g00094 274286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00094 338 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PANTHER PEROXIDASE 61-RELATED 17 336 - -
Cla06g00094 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Cla06g00094 338 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 Pfam Peroxidase 57 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 Gene3D - 42 338 - -
Cla06g00094 338 PANTHER PEROXIDASE 25-RELATED 17 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 SUPERFAMILY Heme-dependent peroxidases 44 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla06g00094 338 CDD secretory_peroxidase 37 336 IPR033905 GO:0004601|GO:0042744
Cla06g00094 338 Gene3D Peroxidase, domain 2 172 317 - -
Cla06g00094 338 ProSiteProfiles Plant heme peroxidase family profile. 37 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00094 Cla-Chr6:994499 Cla09g02209 Cla-Chr9:39723690 5.37E-68 dispersed
Cla06g00094 Cla-Chr6:994499 Cla07g00832 Cla-Chr7:23049341 8.34E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00094 K00430 - csv:101213667 585.489