Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla06g00123 | ATGGCTTCTACTACTGGTCTTGTAGTTGGTTCTCTTGTTTGGTTGGAGGACTCTGAAGAAGCTTGGATAGAGGGCGAAGTTCTAGAACTTCATGGTGAAGAAATTAAGGTCCTATGCACCTCAGGGAAAACGGTTGTAGTCAAAGCAGCTAATGTCTATCCCAAAGATTCTGAAGTGCCACCCTGTGGGGTGGATGACATGACCAAGTTGGCTTACTTGCACGAACCAGGGGTGCTACACAATTTAAAATTGAGATATGATATCAATGAAATATATACTTATACAGGGAACATATTAATTGCCGTGAACCCTTTTACAAAGTTGCCGCATCTCTATGATAGCTATATGATGGCACAATATAAAGGGGCTGCATTTGGTGAGCTGAGTCCACATCCATTTGCAGTTGCAGATTCTGCCTACAGGCATTTTTCCACAATACTTTTACTTATGGTCAATGAGAAAAAAAGTCAATCCATATTGGTCAGTGGTGAAAGTGGGGCTGGAAAGACGGAAAGTACGAAGTTGCTTATGCGTTATCTTGCATATATGGGAGGGAGAGCTGCTGCTGAGGGGAGGTCTGTTGAGCAGCAAGTTCTGGAGTCAAATCCTGTTTTAGAAGCATTTGGGAATGCAAAAACTGTTCGGAACAACAACTCAAGTCGTTTTGGTAAGTTTGTGGAGATCCAATTTGACCAACGGGGAAGAATATCAGGAGCTGCTATCAGAACTTACTTGCTGGAAAGATCTCGTGTTTGTCAGGTGTCCGATCCCGAGAGAAACTATCATTGCTTCTACATGCTTTGTGCTGCACCACCTGAGGAGGTCAAGAAGTATAAATTGGGAAACCCAAGAGATTTCCATTATCTAAATCAATCAAACTGCCACGCTTTGGATGGAATTGATGATGCCAAGGAATATATTGCAACAAGAAAAGCAATGGAAGTTGTTGGGATAAGTTCGGAGGAGCAGGATGGAATATTTCGTGTTGTGGCTGCAATTCTTCATCTTGGAAACATTGAATTTGCAAAGGGGAAGGAGGCTGATTCTTCTGTTCCCAAAGATGAAAAATCTTGGTTCCATCTTAGAACTGCTGCGGAGCTTTTCATGTGTGATGAAAAGGCCTTGGAAGATTCTCTCTGCAAACGTGTGATTGTCACTCGTGATGAAACAATCACAAAGTGGCTGGATCCAAATTCTGCAGCCCTTAGCAGAGATGCTTTGGCAAAAATTGTATACTCAAGGTTATTTGACTGGCTGGTGGACAAAATTAATAATTCAATTGGGCAGGATCCTGATTCGAAATTCTTGATTGGAGTACTCGATATCTATGGATTTGAGAGTTTCAAGACAAACAGATGCCCTGGCATTTGGAGATTCCTAGGCATGCTCTTATGGAGGGCATCTAAGAGTTTTGGATGTCCTCCTGAAACATGGGTTTTCCAGATTCTCGAGTTGAGGGCATACCCATTTTTTGAACAATTTTGCATCAACTTGACTAATGAAAAGCTTCAGCAGCATTTCAATCAGCATGTTTTCAAGATGGAGCAAGAAGAGTATACAAAAGAGGAAATTGATTGGAGCTATATTGATTTTGTTGATAATCAGGATGTCCTTGATCTCATTGAAAAGAAACCTGGTGGTATTATTGCCCTTCTGGATGAAGCATGTATGTTCCCCAGATCAACTCATGAAACATTTGCTCAAAAGTTGTATCAGACATTCAAAAATCATAAACGCTTCAGCAAACCAAAATTAGCCCGGAGTGACTTCACAATTGCTCATTATGCTGGTGATGTCACCTATCAGACTGATTTATTTCTCGACAAAAATAAAGATTATGTTGTTGCTGAACACCAAGCGCTCTTAAGTGCTTCCAAATGCTCCTTCGTGTCATGTTTGTTTCCTCCATTAGCAGAAGAATCTTCCAAATCTTCAAAGTTCTCATCAATAGGTTCTCGTTTCAAGCTTCAATTGGTATCCCTGCTGGAAACTCTAAGTGCTACTGAGCCCCATTACATTCGATGTGTAAAGCCCAATAATCTTCTAAAGCCTGCTATCTTTGAGAATAAGAATATATTACAACAACTACGATGCGGGGGAGTCATGGAGGCAATTAGGATAAGTTGTGCTGGTTTTCCAACGAGGAAAACTTTTGATGAATTTGTTGACCGATTTGGACTCCTTGCACCTGAAGTTTTGGATGGGAGGTATAATTGGTTCTTAGCTTTCTTCAGACTGCAGATGACTGCTTGCAAGAGGCTTCTGGAGAAGGTTGGACTTAAGGGATACCAGATTGGTAAGACGAAGGTGTTTCTTAGAGCCGGTCAGATGGCTGAACTTGATGCGCTCAGAACTGAGATCTTAGGGCGATCAGCAAGTATTATTCAGCGGAAAGTTCGTTCTTATCTGGCACGTAGAAGTTTTGTATTGCTTCGGAGGTCAGCTATATGTCTGCAGTCTGCATGCAGAGGTAATAAATTGTCATCAACAAACTTTTGTACCGGACAACTTGCTCGAGAAGTATTTGAGGGCTTGAGGAGAGAAGCTTCTTCCTTAATGATTCAAAGAAATTTGCGCATGCATATCTGCAGGAAAGCTTACAAAGAAAAGTACTCTTCAGCTGTTTCTATTCAAACTGGAATGCGTGGAATGGCTGCTCGAAATGAGCTACGCTTCAGAAGGCAATCTAAAGCAGCAATTATTATCCAGAGCTACTGTCGCAGATATTTGGCTCAGCTGCACTATAAGAAGTTAAAGAAAGTAGCAATCACAACTCAATCTGCATGGAGAGGAAGAGTTGCTCGTAAGGAACTACGGAAGCTGAAGATGGCTGCAAAGGAAACAGGAGCTCTTCAAGCTGCGAAAAATAAATTGGAAAAGCAAGTCGAGGAATTAACATGGAGACTGCAGTTGGAGAAGCGCATGAGGGCTGACTTGGAAGAAGCTAAAACACAAGAAAATGAGAAGCTGCAATCTGCTTTGAAAGATATGCAGTTTCAATTGAAAGAAACAAAAGCGATGTTTGAGAAGGAACGTGAAGCTGCAAAGAAGGCTGCAGATATTATACCAATTGTGAAGGAGGTTCCAGTTCTTGATAATGCAATGATTGAGAAAATTTCCTGTGAAAATGAAAAGCTCAAGGCGTTGGTAAATTCACTGGAACAGAAAATTGATGAAACAGAGAAAAAGTATGAAGAGGCAAACAGAGTTAGTGAAGAAAGGTTGAAACAAGCATCAGAGGCAGAAACAAAAATTATTCAATTAAAGACTGCTATGCAGAGGCTTGAAGAAAAATTCTCAAATATTGAATCTGAAAATCAGATTCTTCGGCAGCAGACCTTCCTGAAAACACCAGTAAAGAAAATGGCTGACCATCTTCCTATTGCAGCTGCAGAGAAATTTCAGCTTGTAAAATTGAACCTTTTGCGGTTTGATGCTAAACTGGAGAACGGTAACCATTCGATCGAAGATAACAGAATCGATGAGCAGTTTGTAACACCCGTGAAAACGCTGAAGAGAATTAGCTCAGAATCTGAAATTAAGTTGAGTAGATCGCATTTTGAACATCAACAAGAGAATGTTGATGCTCTCGTTAGTTGTGTCATGAATAACATTGGGTTTAGTAATGGGAAGCCTGTAGCTGCATTTACCATTTATAAATGCCTTCTTCACTGGAAATCTTTTGAAGCTGAAAAAACAAGTGTATTTGATCGCCTAATTCAGATGATTGGATCTGCAATAGAGACTCGCATTGTCATTGATGGTCGTAGGTTCAAAACCCCCCAGGATAATCAAGATAACAATGATCATCTAGCCTATTGGTTGTCAAACACATCCGCACTACTGTTCTTGCTTCAACGAAGCTTGAAAGCTCCTGGTGCTCCTCGAAAACCTCCACCTTCAACATCCTTATTTGGAAGGATGACTATGGGTTTTCGTTCGTCTCCTTCTTCCAACAATCTAGGATCTGCACTTAAGGTCGTACGCCAAGTGGATGCTAAATATCCAGCTTTGCTATTCAAGCAGCAGCTGACTGCATATGTCGAGAAAATATTTGGAATTATCCGAGATAACTTGAAGAAGGAGTTGACATCATTGCTTTCCTTGTGTATCCAAGCACCAAGAATTTCGAAAGGAGTATTGCGATCTGGAAGATCGTTTGGGAAAGATACTCAAACAAATTACTGGCAGAGCATCATAGAAAGCCTTAACTTGCTTCTCTGTACATTGAAAGAAAATTTTGTTCCACAAATTCTCATCCAGAATGTCTTTGTTCAAAACTTTTCGTATATTAATGTTCAACTCTTCAATAGCCTCCTTCTCCGTCGAGAATGTTGTACATTTAGCAATGGGGAATATGTAAAATCTGGGTTAGCTGAGTTGGAGCTCTGGTGCTGCCAGGCAAAAGAGGAGTATGCTGGTGCTTCTTGGGATGAGCTTAAACACATAAGACAAGCTGTTGGCTTCTTGGTTATACATCAGAAATACAGAATTTCCTACGATGAAATTACCAATGATCTTTGCCCTATCCTGAGCGTCCAGCAACTTTATAGAATATGTACACTCTACTGGGACGACAACTATAACACTCGAAGCGTATCACCTGATGTAATATCTAGTATGAGAGTGCTCATGACTGAGGACTCCAACAATGCAGTCAGCAGTTCCTTCCTATTGGATGACAATTCCAGCATTCCCTTCTCGATCGAAGACCTATCAAACTCAGTGCAAGAGAAAGATTTCTCTGGTGTGAAGCCCGCCGACGAACTACTCGAGAACCCAGCCTTCCAATTTTTACATGAGTAA | 4806 | 40.93 | MASTTGLVVGSLVWLEDSEEAWIEGEVLELHGEEIKVLCTSGKTVVVKAANVYPKDSEVPPCGVDDMTKLAYLHEPGVLHNLKLRYDINEIYTYTGNILIAVNPFTKLPHLYDSYMMAQYKGAAFGELSPHPFAVADSAYRHFSTILLLMVNEKKSQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEVKKYKLGNPRDFHYLNQSNCHALDGIDDAKEYIATRKAMEVVGISSEEQDGIFRVVAAILHLGNIEFAKGKEADSSVPKDEKSWFHLRTAAELFMCDEKALEDSLCKRVIVTRDETITKWLDPNSAALSRDALAKIVYSRLFDWLVDKINNSIGQDPDSKFLIGVLDIYGFESFKTNRCPGIWRFLGMLLWRASKSFGCPPETWVFQILELRAYPFFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTIAHYAGDVTYQTDLFLDKNKDYVVAEHQALLSASKCSFVSCLFPPLAEESSKSSKFSSIGSRFKLQLVSLLETLSATEPHYIRCVKPNNLLKPAIFENKNILQQLRCGGVMEAIRISCAGFPTRKTFDEFVDRFGLLAPEVLDGRYNWFLAFFRLQMTACKRLLEKVGLKGYQIGKTKVFLRAGQMAELDALRTEILGRSASIIQRKVRSYLARRSFVLLRRSAICLQSACRGNKLSSTNFCTGQLAREVFEGLRREASSLMIQRNLRMHICRKAYKEKYSSAVSIQTGMRGMAARNELRFRRQSKAAIIIQSYCRRYLAQLHYKKLKKVAITTQSAWRGRVARKELRKLKMAAKETGALQAAKNKLEKQVEELTWRLQLEKRMRADLEEAKTQENEKLQSALKDMQFQLKETKAMFEKEREAAKKAADIIPIVKEVPVLDNAMIEKISCENEKLKALVNSLEQKIDETEKKYEEANRVSEERLKQASEAETKIIQLKTAMQRLEEKFSNIESENQILRQQTFLKTPVKKMADHLPIAAAEKFQLVKLNLLRFDAKLENGNHSIEDNRIDEQFVTPVKTLKRISSESEIKLSRSHFEHQQENVDALVSCVMNNIGFSNGKPVAAFTIYKCLLHWKSFEAEKTSVFDRLIQMIGSAIETRIVIDGRRFKTPQDNQDNNDHLAYWLSNTSALLFLLQRSLKAPGAPRKPPPSTSLFGRMTMGFRSSPSSNNLGSALKVVRQVDAKYPALLFKQQLTAYVEKIFGIIRDNLKKELTSLLSLCIQAPRISKGVLRSGRSFGKDTQTNYWQSIIESLNLLLCTLKENFVPQILIQNVFVQNFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCCQAKEEYAGASWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPDVISSMRVLMTEDSNNAVSSSFLLDDNSSIPFSIEDLSNSVQEKDFSGVKPADELLENPAFQFLHE | 1601 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1339129 | 1358807 | - | ClCG06G001310.2 | Cla06g00123 | 274315 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla06g00123 | 1601 | PANTHER | MYOSIN-14 | 491 | 1599 | - | - | |
| Cla06g00123 | 1601 | PANTHER | MYOSIN-14 | 6 | 451 | - | - | |
| Cla06g00123 | 1601 | Gene3D | Kinesin motor domain | 65 | 707 | IPR036961 | - | |
| Cla06g00123 | 1601 | SMART | MYSc_2a | 57 | 786 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | Gene3D | - | 788 | 846 | - | - | |
| Cla06g00123 | 1601 | Gene3D | - | 847 | 896 | - | - | |
| Cla06g00123 | 1601 | Gene3D | - | 897 | 946 | - | - | |
| Cla06g00123 | 1601 | CDD | MyosinXI_CBD | 1188 | 1570 | IPR037975 | GO:0007015 | |
| Cla06g00123 | 1601 | ProSiteProfiles | IQ motif profile. | 847 | 876 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Pfam | Myosin N-terminal SH3-like domain | 10 | 51 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 34 | 826 | IPR027417 | - | |
| Cla06g00123 | 1601 | Pfam | Myosin head (motor domain) | 64 | 451 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | Pfam | Myosin head (motor domain) | 491 | 773 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | ProSiteProfiles | Dilute domain profile. | 1237 | 1547 | IPR002710 | - | |
| Cla06g00123 | 1601 | Coils | Coil | 941 | 1007 | - | - | |
| Cla06g00123 | 1601 | Pfam | DIL domain | 1423 | 1526 | IPR002710 | - | |
| Cla06g00123 | 1601 | ProSiteProfiles | IQ motif profile. | 870 | 899 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | CDD | MYSc_Myo11 | 76 | 773 | IPR036018 | - | |
| Cla06g00123 | 1601 | Coils | Coil | 1036 | 1112 | - | - | |
| Cla06g00123 | 1601 | ProSiteProfiles | IQ motif profile. | 895 | 920 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | PANTHER | MYOSIN | 491 | 1599 | - | - | |
| Cla06g00123 | 1601 | ProSiteProfiles | IQ motif profile. | 790 | 814 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Gene3D | - | 11 | 55 | IPR008989 | GO:0003774|GO:0005524|GO:0051015 | |
| Cla06g00123 | 1601 | SMART | DIL_2 | 1422 | 1529 | IPR002710 | - | |
| Cla06g00123 | 1601 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | Gene3D | - | 259 | 317 | - | - | |
| Cla06g00123 | 1601 | Gene3D | - | 712 | 784 | - | - | |
| Cla06g00123 | 1601 | SMART | iq_5 | 787 | 809 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | SMART | iq_5 | 894 | 916 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | SMART | iq_5 | 917 | 939 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | SMART | iq_5 | 846 | 868 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | SMART | iq_5 | 869 | 891 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Pfam | IQ calmodulin-binding motif | 812 | 826 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Pfam | IQ calmodulin-binding motif | 920 | 939 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Pfam | IQ calmodulin-binding motif | 790 | 808 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Pfam | IQ calmodulin-binding motif | 897 | 916 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Pfam | IQ calmodulin-binding motif | 850 | 868 | IPR000048 | GO:0005515 | |
| Cla06g00123 | 1601 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 319 | 646 | - | - | |
| Cla06g00123 | 1601 | ProSiteProfiles | Myosin motor domain profile. | 62 | 785 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 849 | 947 | IPR027417 | - | |
| Cla06g00123 | 1601 | Gene3D | - | 446 | 668 | - | - | |
| Cla06g00123 | 1601 | PRINTS | Myosin heavy chain signature | 203 | 230 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | PRINTS | Myosin heavy chain signature | 156 | 181 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | PRINTS | Myosin heavy chain signature | 436 | 464 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | PRINTS | Myosin heavy chain signature | 527 | 555 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla06g00123 | 1601 | PANTHER | MYOSIN | 6 | 451 | - | - | |
| Cla06g00123 | 1601 | ProSiteProfiles | IQ motif profile. | 918 | 947 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla03g00451 | Cla-Chr3:5097394 | Cla06g00123 | Cla-Chr6:1339129 | 1.58E-07 | dispersed | |
| Cla06g00123 | Cla-Chr6:1339129 | Cla09g00324 | Cla-Chr9:3151804 | 0 | dispersed | |
| Cla03g01472 | Cla-Chr3:30225431 | Cla06g00123 | Cla-Chr6:1339129 | 0 | transposed | |
| Cla05g00393 | Cla-Chr5:3553666 | Cla06g00123 | Cla-Chr6:1339129 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla06g00123 | K10357 | - | csv:101208630 | 2819.65 |