Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00141 ATGTTGAACCCAAATAATATATATGTGTGTGTGTGTGTTGAATCAAGAAGACTAGCTGAGAAGGAGCCCAACAATCTGAGGAAAATGGAAGACTCCATCTCACTCTATTCAGCCATTTCAATTCTGAGTATTGCTGTAGTTTTGGCAATCATAAAGTATTTGTTTAAATCCAATTCCTACAAAAATCTTCCTCCAAGTCCACCCTCTATTCCAATTATAGGTCACCTCCATCTCCTTAAGCCCCCAGTTCATAGAAGCCTACAAACTCTCTCACAAAAGCATGGTCCAGTACTTTCTCTTCGGTTCGGCTCTCGTTTAGTCGTCATCGCTTCGTCAATGGAAGCTGCAGAAGAATGCTTCACCAAAAACGACATCGTTTTTGCAAACCGTCCCGACTTCGCCGTCAGCCGGTGCTTGAGTTACAACCAAACCACCCTCGGAGCGGCTCCGTACGGTGACCACTGGCGTAAACTTCGGCGTGTGAGTGCGCTCGAAATACTGTCTTCGAATCGGCTTAACGCAAATCACGAGATTCGGAGAGACGAAATGAGAAGAGCAATGAAGAAGATATATGAAATTTCAAGAGACGGTTATGGAAAAGTGGAGTTGAAATCAATGGTGAAGGAATTGACATTGAATATAACAATGAGAATGGTGGCAGGGAAGAGATATTATGGTGAAGAAGCAGCAAAAAGTAGTGAAGCAAGAACATTCCAAGCTATTGTGGATGAGCTTTTTGAATTTACTTTGTCTTCATATCCAGCTGACTTCTTGCCAATTTTGAAGTATATTGATATTCAAGGTTTCATGAAGAGGGCAAAGAAGCTTATCACAAGGGTTGATTCATTTTGGCAAGGACTGATTGATGAACATAGAAGAGGTGAAATCAGTAATGAAGAAATGGAGAATTGTATGGTTGCTCATTTCCTTAAGTTGCAAGAGTCACAGCCTGAGTATTATACAGATGATATTATCAAAGGCTTGATTTTGACGATGATACTTGGTGGGTCAGACACTACTGCGGTGACAATAGAGTGGGCAATGTCAAATCTCCTAAACCATCCATCGGTACTGAAGAAGGCAAGAGCTGAATTAGAGTCTCAACTTGGTGGAGATCGATTGCTTGAAGAATCCGATCTTTCAAAATTAAGTTACCTAAGATGTATAGTCCTAGAAACTCTTCGGTTGTACCCGGCTGGTCCGCTCCTACTGCCACATAAGTCTTCTGCTGACTGTACCATATCAGGATACGACGTGCCACGTGACACCATCTTATTAGTGAATGCGTGGGCCATCCATAGGGACCCCACATTGTGGGAAGATCCAACAAGTTTTAAACCAGAGAGGTTTGAGAATAGTGGGGAAGGGGATGCAAATAGTAAGTTAATGATAGCATTTGGTTTGGGAAGAAGAGCTTGTCCAGGAACTGGAATGGCACATAGAGTGTTGGGTTTGAGTCTTGGACTGTTGATTCAATGTTTTGATTGGAAGAGTATTGAAGGTAAGGAAATAGATATGACTGAAGGAAAAGGGGTTAGTATGCCTAAAGCTCAACCACTTGAAGCACTATGTAAAGCAAGAGAAATTGCAACCAAGCTGCTTTGA 1605 41.99 MLNPNNIYVCVCVESRRLAEKEPNNLRKMEDSISLYSAISILSIAVVLAIIKYLFKSNSYKNLPPSPPSIPIIGHLHLLKPPVHRSLQTLSQKHGPVLSLRFGSRLVVIASSMEAAEECFTKNDIVFANRPDFAVSRCLSYNQTTLGAAPYGDHWRKLRRVSALEILSSNRLNANHEIRRDEMRRAMKKIYEISRDGYGKVELKSMVKELTLNITMRMVAGKRYYGEEAAKSSEARTFQAIVDELFEFTLSSYPADFLPILKYIDIQGFMKRAKKLITRVDSFWQGLIDEHRRGEISNEEMENCMVAHFLKLQESQPEYYTDDIIKGLILTMILGGSDTTAVTIEWAMSNLLNHPSVLKKARAELESQLGGDRLLEESDLSKLSYLRCIVLETLRLYPAGPLLLPHKSSADCTISGYDVPRDTILLVNAWAIHRDPTLWEDPTSFKPERFENSGEGDANSKLMIAFGLGRRACPGTGMAHRVLGLSLGLLIQCFDWKSIEGKEIDMTEGKGVSMPKAQPLEALCKAREIATKLL 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1614335 1616302 - ClCG06G001570.2 Cla06g00141 274333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00141 534 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 40 529 - -
Cla06g00141 534 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 Pfam Cytochrome P450 64 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 40 529 - -
Cla06g00141 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Cla06g00141 534 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 Gene3D Cytochrome P450 55 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00141 534 SUPERFAMILY Cytochrome P450 64 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00141 Cla-Chr6:1614335 Cla06g00143 Cla-Chr6:1626534 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00141 K13260 - csv:101208069 875.159