Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00142 ATGATGGATGGTTGGCTAACAGCGCTCCTTGCCCTTTCAATTTGTGCAGTCTTACACTTAGTTTTGAGCTTTATTTTGCATCGTAAGCAAAATCTCCCCCCCGGTCCTCTTGCTTTACCTCTTATAGGCAATCCCATATGGCTTTTCAAGCCTCTTTCCCAACTTGAAACCATTCTTCGCCATTACCATTCCAAATACGGCCCTGTTGTTACCCTTTACTTCGGTAACACTCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCACCATGCTTTGGTTCAAAACGGCGCCGTCTTCGCCGACCGTTTCCCCGTCATGGAAACTGCCAAAATCATCACTAGTAACCAACATAATATCAGCACCGCTTTCTACGGTCCCACATGGCGTATTCTCCGCCGCAACCTCACCTCCGAGCTCCTCCATCCGTCTCGATTGAAAGCTCACTCGCCTACTCGTAAATGGGTGTCGGATGATCTCGTCCATCGCCTCCATCAGGCCCCTGGTCCTGTAAAGCTCCTTGACCATCTTCGTTATGCTATGTTTTGTTTAGCTACAACTATGTGTTTTGGGGAGAGATTTGATGAGAAATTGATTCGTGAAATACAAGAATCTCAACGTGGGGTGTTGTTGAATATCACCAAGTTCAATGATCTTAATTTTTGGCCTCCTAGATTGGGGAAGTTTTTGTTCAAGAAGCGTTGGGAAGAGATTCGTCAACTACGTAAACGTCAAGATGATTGCTTATTACCTTTGATTAACAAAGCAAGACAAAACAGAACAACAATCAAAGATAAAGAAGCTGCAGGGAAGGCAATCCCTTATGTTGATACTCTGTTTGATTTGGAAATTGCTGACAACAATGATGAGAAGGTAAAGAGGAAATTGGTTGATGATGAGCTCATAACATTATGCTCTGAGTTTCTTGATGCCATTACGGATACAACGACCGTGTCATTGCAATGGATAATGGCGAATTTAGTGAAGCAAACAGAAATTCAAGAGAAAGTGTACAAGGAGATAAAAGAAGTGATGCAAAATAAGGAGAAGAATGAAGAGATAGAAGAGGAAGATTTGGGGAAGATGACATATTTGAAAGCAGTAATAATGGAAGGACTACGGCGACATCCGCCGGGGCATTTTTTGTTGCCTCATCAAGTGATGGAGGATAGTGTTTTGGAAGGAGGATACAAGGTGCCCAAAGGAACATCAGTGAACTTTATGGTAGCAGACATGGGTTGGGACCCGAAAGTATGGCCGGAACCGACGGCGTTTAAGCCGGAGAGATTCTTGAATGATAGGTCAATGGGAGGGGTTGAATTGGAAGTTGATATCACAGGAAGTAAGGAAATAAAGATGATGCCATTTGGGGCTGGGAGGAGGATATGCCCAGGATTTGCGTTGGGATTATTGCATTTGGAGTATTACATTGGGAATTTGGTGTGGAACTTCGAGTGGAAGGCTGCTGGGGAAGTTGATTTGACTGAGACCCAAGAAAATGCTGTCACCATGAAATATCCCTTGCTTGCTTACTTGTCTCCAAGGCTTGTTTCTTAG 1554 43.76 MMDGWLTALLALSICAVLHLVLSFILHRKQNLPPGPLALPLIGNPIWLFKPLSQLETILRHYHSKYGPVVTLYFGNTPSIFIASHSVSHHALVQNGAVFADRFPVMETAKIITSNQHNISTAFYGPTWRILRRNLTSELLHPSRLKAHSPTRKWVSDDLVHRLHQAPGPVKLLDHLRYAMFCLATTMCFGERFDEKLIREIQESQRGVLLNITKFNDLNFWPPRLGKFLFKKRWEEIRQLRKRQDDCLLPLINKARQNRTTIKDKEAAGKAIPYVDTLFDLEIADNNDEKVKRKLVDDELITLCSEFLDAITDTTTVSLQWIMANLVKQTEIQEKVYKEIKEVMQNKEKNEEIEEEDLGKMTYLKAVIMEGLRRHPPGHFLLPHQVMEDSVLEGGYKVPKGTSVNFMVADMGWDPKVWPEPTAFKPERFLNDRSMGGVELEVDITGSKEIKMMPFGAGRRICPGFALGLLHLEYYIGNLVWNFEWKAAGEVDLTETQENAVTMKYPLLAYLSPRLVS 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1619095 1620648 + ClCG06G001580.2 Cla06g00142 274334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00142 517 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PANTHER CYTOCHROME P450 6 513 - -
Cla06g00142 517 Coils Coil 337 357 - -
Cla06g00142 517 Gene3D Cytochrome P450 25 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 513 - -
Cla06g00142 517 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 Pfam Cytochrome P450 33 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00142 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Cla06g00142 517 SUPERFAMILY Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00142 Cla-Chr6:1619095 Cla09g01651 Cla-Chr9:33018725 0 dispersed
Cla06g00142 Cla-Chr6:1619095 Cla05g02200 Cla-Chr5:33704012 2.23E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00142 K24184 - csv:101204774 850.892