Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g00261 | ATGTCGTTGAGTAGCGAAATCGAAAGCCTTTGGGTTCTGGCTTTGGCTTCCAAATGCTCAGCTCTCACTAAACAAAACATCTTTTTCTCTCTACTTCTTCTCCTCCTAATTTGGTTTTTCCTTTCCATTTTCTATTGGGCCCATCCTGGCGGCCCAGCTTGGGGCCGCCGCCGCAATTCCTCCTCCTCCTCCTCCTCCGCCACCATCCCTGGCCCAAGAGGCCTCCCCCTCATCGGCAGTATGAGCTTGATGACGGGTCTGGCCCACCAAAAGATCGCCGCCATGGCCAAATCTCTAGGAGCTACTCGTCTCATGGCTTTCTCACTCGCCAACACTCGCGTGATTGTCACATGCCACCCAGACGTAGCTAAAGACATCCTAAACAGTTCCGTCTTCGCTGACCGTCCGATCAAAGAATCAGCTTACTCTTTGATGTTCAATCGTGCCATTGGATTTGCTCCTTACGGACTTTACTGGCGAACCCTCCGACGAATCGCTTCACACCATCTCTTCTGCCCTAAACAAATCAAATCCTCTGAATCACAACGCCGCCAAATCGCTTCCCAAATGGTCAAAATCTTGTCTTCCACTGCCGCCACCTCATCCTCTCTCCACATTCGTCAAACTCTTAAAACCGCCTCTTTGAATAGCATGATGGGTTCGGTTTTCGGCCGGTTTTACAATCTCTCCGACTCTAATCCTGAAGTCCAACTCCTCCAAAGCCTTGTGAATGAAGGGTATGATTTACTAGGCCTTCTTAACTGGTCCGACCATCTTCCCTTTTTGGCTGATTTCGACCCACAAAAAATCCGGTTCAGATGCTCCCGGTTGGTTCCACAGGTGAACCGCTTCGTCACCCGGATCATCAACCAACATCGGCAAAATTCATCCCAACAAACCATGGATTTCGTCCATGTTCTTCTCTCTCTTCAACAAAACGACAACCTCTCTGACTCCGATATTATCTCCGTTCTTTGGGAAATGATATTTAGAGGAACAGACACGGTAGCGGTTTTAATCGAGTGGATTCTAGCGAGGATGGTGGTTCACAAGGAGGAGCAACAAAAAATACAAGAGGAATTAGATAAGGTGGTTGGGAGATCACGTGCCGTCGTGGAATCCGACATTCCGTCGTTGGTTTATTTAACCGCGGTGGTTAAGGAAGTTCTAAGGTTGCATCCACCCGGCCCACTTCTGTCTTGGGCTCGTCTTGCTATTACCGATACAATCGTCGATGGTCATCACGTGCCTCGTGGGACCACTGCCATGGTTAACATGTGGTCGATAGCGCGGGACCCACAAATCTGGTCGGACCCACTTGAATTTATTCCTGAGAGGTTTCTCTCTGGTGGTGCTGACTTGGAGTTTTCGATTATGGGTTCGGATCTACGACTAGCTCCATTCGGGTCGGGTCGAAGGACTTGTCCTGGGAAGGCACTTGCTTGGACAACTGTCACATTTTGGGTGGCTACGCTATTACATGAATTTAAATGGTTGCCTTCTCCTGATCAAAACGACGCCGTCGACTTCTCTGAGGTTCTTAAGCTCTCTTGTGAGATGGCTAGTCCACTCACGGTTAAACTATGCCCAAGGCGCACTTAA | 1602 | 49.25 | MSLSSEIESLWVLALASKCSALTKQNIFFSLLLLLLIWFFLSIFYWAHPGGPAWGRRRNSSSSSSSATIPGPRGLPLIGSMSLMTGLAHQKIAAMAKSLGATRLMAFSLANTRVIVTCHPDVAKDILNSSVFADRPIKESAYSLMFNRAIGFAPYGLYWRTLRRIASHHLFCPKQIKSSESQRRQIASQMVKILSSTAATSSSLHIRQTLKTASLNSMMGSVFGRFYNLSDSNPEVQLLQSLVNEGYDLLGLLNWSDHLPFLADFDPQKIRFRCSRLVPQVNRFVTRIINQHRQNSSQQTMDFVHVLLSLQQNDNLSDSDIISVLWEMIFRGTDTVAVLIEWILARMVVHKEEQQKIQEELDKVVGRSRAVVESDIPSLVYLTAVVKEVLRLHPPGPLLSWARLAITDTIVDGHHVPRGTTAMVNMWSIARDPQIWSDPLEFIPERFLSGGADLEFSIMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHEFKWLPSPDQNDAVDFSEVLKLSCEMASPLTVKLCPRRT | 533 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3368947 | 3370714 | + | ClCG06G002810.1 | Cla06g00261 | 274453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g00261 | 533 | SUPERFAMILY | Cytochrome P450 | 69 | 531 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 468 | 477 | IPR017972 | GO:0005506|GO:0016705 | |
Cla06g00261 | 533 | Pfam | Cytochrome P450 | 70 | 506 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | Gene3D | Cytochrome P450 | 55 | 528 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PANTHER | CYTOCHROME P450 78A7-RELATED | 4 | 533 | - | - | |
Cla06g00261 | 533 | PRINTS | E-class P450 group I signature | 213 | 231 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | E-class P450 group I signature | 320 | 337 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | E-class P450 group I signature | 340 | 366 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | E-class P450 group I signature | 383 | 401 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | E-class P450 group I signature | 425 | 449 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | E-class P450 group I signature | 465 | 475 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | E-class P450 group I signature | 475 | 498 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | P450 superfamily signature | 331 | 348 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | P450 superfamily signature | 384 | 395 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | P450 superfamily signature | 466 | 475 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PRINTS | P450 superfamily signature | 475 | 486 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g00261 | 533 | PANTHER | CYTOCHROME P450 78A6 | 4 | 533 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g00261 | Cla-Chr6:3368947 | Cla08g01050 | Cla-Chr8:23178388 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g00261 | K20619 | - | csv:101216159 | 907.901 |