Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00341 ATGGACGTGGGATTCGCGTTAGTTATAGTAACGGCAGTAACGGCGTATCTTCTTTGGTTTACTTTCATTTCACGGTCGTTAAAAGGTCCTCAAATGTGGCCGTTACTCGGCAGCCTCCCCGGGTTGGTAGAAAATTGCGACCGTCTACACGACTGGATCTCCGACAACCTCCGCGCGTGTGGCGGCACGTATCAAACCTGCATCTGGGCTTTCCCTTTCTTCGCTAAAAAGCAAGGCCTCGTGACTGTCACGTGTGACCCGAGAAATCTGGAACATATTCTCAAGACCCGATTCGATAATTACCCTAAAGGCCCCACTTGGCAAGCTGTTTTTCATGAGTTACTTGGACAAGGCATCTTTAACTCCGACGGTGACACCTGGCTTTTCCAGAGAAAAACTGCTGCTTTGGAATTTACTACTAGAACCCTTCGTCAAGCCATGGCTCGATGGGTTAGCCGAGCTATTAAGTTGAGGTTTTGCCCTATTCTTAAACAAGCCCAGCTCAATTCTCAACCCATTGATCTTCAGGATCTGTTGTTACGTCTTACTTTTGATAATATTTGTGGCTTGGCTTTTGGTAAAGACCCCATGACTTGCGCGCCGGGTTTCCCCGAAAATGGCTTTGCTATGGCTTTCGATCGAGCCACCGAGGCTTCCTTGCAACGCTTTATTCTACCGGAAGTGCTTTGGAAATTCAAAAAGTTGCTTCGGCTTGGAATGGAAGTCAGCTTGAGCCGGAGCTTAGTCCATATTGAGGAGTATTTATCCAGTGTGATTGATTCACGTAAGCTCGAGTTGCTTAATCAGCCTAAAGACTCCACCTCACATGATGATTTGTTGTCACGTTTCATGAAGAAAAAGGATGGTAATTACTCCAACGCGTTCCTCCGCCACGTCGCGCTTAATTTCATCCTAGCTGGACGGGACACGTCATCCGTTGCGCTGAGCTGGTTTTTCTGGTTGGTAACTTTAAACCCGCTCATTGAAGAAAAAATAATCCGCGAGATCTGCACCGTTCTGATTGAGACTCGTGGAAATAACATCCAATCATGGCTCGAGGAACCGTTAGGATTCGAAGAGGTCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTAAGATTGTACCCGTCAGTGCCGGAGGATTCAAAGCATGTCGTCGCCGACGACGTTCTGCCGGATGGAACCTTCGTTCCGGCGGGATCGTCAGTGACTTATTCCATCTATTCCACCGGAAGAATGAAGTCGACGTGGGGAGAAGACTGCCTGGAATTCCGGCCGGAGCGGTGGTTGACGGCGGACGGAAAGAAATTCATACCGTACGATCCGTACAAATTCGTAGCGTTCAATGCAGGGCCGAGGATCTGCTTAGGGAAGGATTTGGCGTATTTACAGATGAAGTCGATAGCGGCGGCGGTGCTACTTCGGCACCGGCTGACGGTGGCGGCGGGGCATAAGGTGGAGCAAAAAATGTCGTTGACGCTGTTTATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGAGATTTGGAGGGAATTGTGGAAAGTATCAGGGGCAAATACGGAAATTGGCAAGGGAAAGATGCTCCGTTAGTCGCCGTTGTGAACTGCAACGGCGGGTGTAACGGATTTAACGAAGTACCATGCTAA 1656 49.21 MDVGFALVIVTAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLVENCDRLHDWISDNLRACGGTYQTCIWAFPFFAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAQLNSQPIDLQDLLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKLLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQPKDSTSHDDLLSRFMKKKDGNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPLIEEKIIREICTVLIETRGNNIQSWLEEPLGFEEVDRLIYLKAALTETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGKKFIPYDPYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRDLEGIVESIRGKYGNWQGKDAPLVAVVNCNGGCNGFNEVPC 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4336709 4338364 + ClCG06G003630.1 Cla06g00341 274533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00341 551 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PANTHER CYTOCHROME P450 7 523 - -
Cla06g00341 551 SUPERFAMILY Cytochrome P450 21 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Cla06g00341 551 Pfam Cytochrome P450 28 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PANTHER CYTOCHROME P450 86A2 7 523 - -
Cla06g00341 551 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g00341 551 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00084 Cla-Chr3:890944 Cla06g00341 Cla-Chr6:4336709 0 dispersed
Cla06g00341 Cla-Chr6:4336709 Cla09g00419 Cla-Chr9:3995408 5.56E-153 dispersed
Cla11g00884 Cla-Chr11:14972065 Cla06g00341 Cla-Chr6:4336709 1.40E-127 transposed
Cla01g00254 Cla-Chr1:2583198 Cla06g00341 Cla-Chr6:4336709 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00341 K15398 - csv:101221526 1073.92