Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g00516 | ATGAGAACTTCATATCATGGCTTCCCCCTCTTCTCTGTACTGGTTTTCAGTACTCTTCTTGCTCTTCAGGTCGTCAATGGAGCTTTGATCAATAATTTCTATAGGAGAAGTTGCCCCAAAGCTGAGAGAATCATTCAAGACGTCACCTTTCGTCTTGCACGATCAAATCCCAGCCTCGGCGCTCAACTCCTCAGACTTCAATTCCACGACTGTTTCGTTCGGGGATGTGATGCTTCAATTCTATTAGATACCGTTGGAACAAACCCATCAGAGAAAGATGCAAGGCCGAACCAATCTCTATTAGGGTTTGATGCCATTGACAAAATCAAGTTTGAGGTCGAAAAAGCTTGTCGTGGAGTTGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTCGTGATGCTGTTTCTTTTCCGTTCAAGAATCGGCCGCAATGGCCAGTCTTAACCGGAAGAAGAGACGGGACAGTTTCACGATCATCAGAAGTTACCGGTAATATTCCGTCGCCGTTCTCCGATTTTGCCACTCTTAAGCAACTCTTCCAGAAGAAAGGCCTAACCGTGACCGACCTGGTGATTTTATCAGGTGCTCACACAATTGGAGTAGCTCATTGTGGCACATTCTCAAGGAGGCTTTATAACTTCACAGGCAAAGGAGATGCAGATCCTTCATTAGATCCAAAATATGCAGATTTCCTTAGAACAAAATGTCCAAATCCAGCTGACCCTTCCATTACAGTTGAAATGGATCCAAGGAGTTCTCGTTCCTTTGACAGTGACTATTTCAAAATTGTCACACAAAAAAAGGGTTTGTTTCAATCTGATGCCGCACTTCTCACCGACGCTTCGTCGTCTCGTACCGTCAAACAGTTGCAGAATCCAAGGGCTTTCTCTTCTAGCTTTGCTAATTCCATGTTAAAGATGGCTGCCATTGAAGTACTCACGGGACCTAATAATGGTGAAATTAGACAACGATGTCGTTTTGTCAATTAA | 990 | 43.84 | MRTSYHGFPLFSVLVFSTLLALQVVNGALINNFYRRSCPKAERIIQDVTFRLARSNPSLGAQLLRLQFHDCFVRGCDASILLDTVGTNPSEKDARPNQSLLGFDAIDKIKFEVEKACRGVVSCADILALAARDAVSFPFKNRPQWPVLTGRRDGTVSRSSEVTGNIPSPFSDFATLKQLFQKKGLTVTDLVILSGAHTIGVAHCGTFSRRLYNFTGKGDADPSLDPKYADFLRTKCPNPADPSITVEMDPRSSRSFDSDYFKIVTQKKGLFQSDAALLTDASSSRTVKQLQNPRAFSSSFANSMLKMAAIEVLTGPNNGEIRQRCRFVN | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6238791 | 6241624 | + | ClCG06G005500.2 | Cla06g00516 | 274708 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g00516 | 329 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 189 | 199 | IPR019793 | - | |
Cla06g00516 | 329 | Gene3D | - | 32 | 329 | - | - | |
Cla06g00516 | 329 | PRINTS | Haem peroxidase superfamily signature | 60 | 74 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Haem peroxidase superfamily signature | 121 | 138 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Haem peroxidase superfamily signature | 141 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Haem peroxidase superfamily signature | 189 | 204 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Haem peroxidase superfamily signature | 249 | 264 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 329 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | ProSiteProfiles | Plant heme peroxidase family profile. | 28 | 329 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PANTHER | PEROXIDASE | 10 | 328 | - | - | |
Cla06g00516 | 329 | Pfam | Peroxidase | 51 | 291 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | ProSitePatterns | Peroxidases active site signature. | 60 | 71 | IPR019794 | GO:0004601 | |
Cla06g00516 | 329 | PANTHER | PEROXIDASE 25-RELATED | 10 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 38 | 57 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 62 | 82 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 101 | 114 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 120 | 130 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 188 | 200 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 247 | 262 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 263 | 280 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | PRINTS | Plant peroxidase signature | 302 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g00516 | 329 | Gene3D | Peroxidase, domain 2 | 167 | 307 | - | - | |
Cla06g00516 | 329 | CDD | secretory_peroxidase | 32 | 328 | IPR033905 | GO:0004601|GO:0042744 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00824 | Cla-Chr2:10994851 | Cla06g00516 | Cla-Chr6:6238791 | 1.84E-107 | dispersed | |
Cla06g00516 | Cla-Chr6:6238791 | Cla11g00913 | Cla-Chr11:15495659 | 6.33E-73 | dispersed | |
Cla06g00516 | Cla-Chr6:6238791 | Cla06g00517 | Cla-Chr6:6258343 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g00516 | K00430 | - | csv:101215642 | 552.362 |