Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00582 ATGAATGGTTCTTCAACAACAAATTCTGAACCAGACATCTCTGAATATGTTGAAGTTGATCCTACCGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGAGCATCGAAGACAGTTTACAGAGCTTTTGATGAATACGATGGCATTGAAGTGGCGTGGAATCAAGTGAAGCTTTGTGATTTTCTTCAAACTCCTGAAGATCTTGAAAGGCTGTACAGAGAAATCCATTTGTTGAAGACACTAAAACACAAAAACATAATGAAATTTTATTCTTCTTGGGTTGACACTGCAAATAGAAACATTAACTTTGTAACAGAGATGTTCACTTCTGGGACTCTCAGACAATATAGGCTGAAGCATAAGAGAGTGAATATCAGAGCTGTGAAGCATTGGTGTAGACAGATTTTAAAAGGGCTTCTCTATCTTCACAGCCATGACCCTCCTGTGATCCACAGAGACCTTAAATGTGATAATATTTTTGTAAATGGGAATCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCTATTCTTCGTAAATCCTATGTAGCTCGATGTGTTGGAACACCAGAGTTTATGGCTCCAGAGATTTATGAAGAGGAGTATAATGAATTGGTTGATATATATTCTTTTGGGATGTGTATTTTAGAGATGGTCACTTTTGAATATCCATACAGTGAATGCACTCACCCTGCTCAGATTTACAAGAAAGTTATCTCTGGGAAGAAACCGGATGCTCTGTATAAGGTAAAGGATCTCGAGGTTCGATATTTCGTCGAGAAATGTTTGGCTACTGTGTCAACTAGGCTGTCTGCTAGGGAGCTTTTAAACGACCCTTTTCTTCAAATTGATGGTTGTGATTCTTTACTGAGGCCAATAGAGTACTATTCAGAATATGATGAAGTGAACAATTCCCTTATCAGAGGAGGGCCTTTTTATGGAATTCCTCATGGTTCTTTGGATAATGGGTATGTGAATTATTTTGGTCATGAGGCTGGGAATGGTTTGGATTACTGTCCGATTGATAACGAAGCGAATGAAATCGATCTTTTCTCCTGTCAAGAGGATGAGCATTTGGCAGATGTTGATATCACTATTAAAGGGAGAAGAAGAGGTGACGATGATATCTTTCTTCGACTTCGGATTGCAGATAAAGAAGGTCGAATTCGAAACATCTACTTTCCCTTCGATTTAGAGAATGATAGTGCTTTGAGTGTTGCAAATGAGATGGTTTCTGAGCTTGACATTACTGATCAAGATGTGAAGAAGATTGCTGATATGATAGATGGTGAAATTGCTACATTGGTGCCAGAGTGGAAGAGGGGAAAAAGTTCAGAGGAAACTCCAAATTGCACGGATTCTAATGTTTGTCACAATTGTGCTTTAAACAATTCTCTTTTGGATTATGTATCGCCGAATAATCCCGCGACGAAGAACTTGCACATTCTTCAGTGTTCTCAAGAGCATGGCTGTGCTTCTATCCATGGACGTTTTGAAGAGATTACATACCAAGTTGAGGGGTCAGAACAATTCAATGGAGACGAAAACTTGCATAGAACAACGGAGAATTCAAACGATATCCATTACACCGATATTTGGGCGCAACGAGATGGACCAGATGCAGTTTCTCAAGAATCTTTAGAAACTTGCAATGAATCTGGAACATTGGAACAGCCGAAACTCGAGAAGGAAGAAAGTAATGTAAATATGGACAATGATCATCAAATGGAATTCCAAACAAGAAACTCTAGCTCATCAAATCCTTCACTGTCCTTTGTCAACGATCACGAGAACGAAATTCGACAAGAACTAAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGCTAAGGGATCAACAGTTAGGAGTCAAGACCAAATCTCTTAGCTTGCATCCGAATCCCAACCTTGTGGAGACCGACAATGGAGCTTCGGTATCTTTGCTTTCGCCAAACTTCAATGAAGCAGCAAAAAGTAAGCCTGCCCTAACATCTCTCTCCGTTAGCAAGAATATCACTTCACATTCCTTCTATGCTGCTGTCGATAACATTATGGAAAACCAAACCTTCCAAGACGACAAAGTCGTTGTCGACGAGCCGAGTAGTCCTGAGCTGATGGTTGCTGCCAAGAGTTTCTATGGAGGAGCATTGTTTCCAAATTCTCTTCAAAGAGCAACCTCACTTCCTGTTGATGCTATAGACTTTTAG 2217 40.01 MNGSSTTNSEPDISEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGIEVAWNQVKLCDFLQTPEDLERLYREIHLLKTLKHKNIMKFYSSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDLEVRYFVEKCLATVSTRLSARELLNDPFLQIDGCDSLLRPIEYYSEYDEVNNSLIRGGPFYGIPHGSLDNGYVNYFGHEAGNGLDYCPIDNEANEIDLFSCQEDEHLADVDITIKGRRRGDDDIFLRLRIADKEGRIRNIYFPFDLENDSALSVANEMVSELDITDQDVKKIADMIDGEIATLVPEWKRGKSSEETPNCTDSNVCHNCALNNSLLDYVSPNNPATKNLHILQCSQEHGCASIHGRFEEITYQVEGSEQFNGDENLHRTTENSNDIHYTDIWAQRDGPDAVSQESLETCNESGTLEQPKLEKEESNVNMDNDHQMEFQTRNSSSSNPSLSFVNDHENEIRQELRWLKAKYQMQLRELRDQQLGVKTKSLSLHPNPNLVETDNGASVSLLSPNFNEAAKSKPALTSLSVSKNITSHSFYAAVDNIMENQTFQDDKVVVDEPSSPELMVAAKSFYGGALFPNSLQRATSLPVDAIDF 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7111152 7114501 + ClCG06G006190.1 Cla06g00582 274774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00582 738 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Cla06g00582 738 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Cla06g00582 738 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 727 - -
Cla06g00582 738 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 433 IPR024678 GO:0004674|GO:0005524
Cla06g00582 738 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g00582 738 ProSiteProfiles Protein kinase domain profile. 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g00582 738 SMART serkin_6 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g00582 738 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 727 - -
Cla06g00582 738 CDD STKc_WNK 24 283 - -
Cla06g00582 738 Gene3D - 377 465 - -
Cla06g00582 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Cla06g00582 738 Coils Coil 603 623 - -
Cla06g00582 738 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00582 Cla-Chr6:7111152 Cla06g00905 Cla-Chr6:14489112 0 dispersed
Cla01g00156 Cla-Chr1:1585161 Cla06g00582 Cla-Chr6:7111152 2.30E-154 transposed
Cla02g00919 Cla-Chr2:14042250 Cla06g00582 Cla-Chr6:7111152 1.41E-107 transposed
Cla02g01864 Cla-Chr2:33833122 Cla06g00582 Cla-Chr6:7111152 1.71E-164 transposed
Cla03g00290 Cla-Chr3:3553417 Cla06g00582 Cla-Chr6:7111152 5.25E-170 transposed
Cla05g00072 Cla-Chr5:738084 Cla06g00582 Cla-Chr6:7111152 2.21E-157 transposed
Cla10g00434 Cla-Chr10:5845994 Cla06g00582 Cla-Chr6:7111152 3.00E-122 transposed
Cla02g01615 Cla-Chr2:30873725 Cla06g00582 Cla-Chr6:7111152 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80625 PF00069 Pkinase 4.30E-49 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00582 K08867 - csv:101210511 1365.9