Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00662 ATGAGCCAACAAGTGGGAGTGCTAAATGCACTCGACATTGCAAAAACCCAATGGTACCATTTCACTGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGATCTCTTCTGCATCTCCATCGTCACTAAACTCCTCGGCCGTATCTATTACCATATTCCAAATTCCCCCAGACCCGGCTCCCTCCCCCCCAACATCGCCGCCGCCGTCAACGGCGTCGCCTTCTGCGGCACCCTCAGCGGCCAACTCTTCTTCGGCTGGCTCGGTGACAAGCTCGGCCGCAAGAAAGTCTACGGCATTACCCTCATTCTCATGGTCGTCTGTTCCATCGCCTCCGGCCTCTCCTTCGGCAACTCCCCAAAAGCCGTCATCGCCACCCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACCATCATGTCCGAATACGCCAACAAAAAAACCCGCGGCGCCTTCATCGCCGCGGTTTTTGCAATGCAAGGCTTCGGAATTTTAGGGGGAGGAATCGTCGCTTTAATCGTCTCTTCCGCTTTCAACAACCGCTTCCCAGCACCACCGTACATGGACAATCCCAACCGCCCCACAATACCGGAGGCCGATTACGTGTGGCGAATCGTCTTAATGTTCGGCGCAATTCCAGCCGCGTTAACTTATTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCCTTAGTAGCCCAAAATGCAAAACAAGCCGCCGCCGACATGTCGAAAGTGCTGCAAGTGCAACTCGAATTAGCCGAACATGAAAAAACCATGATCGAACCAAATGAAAATCAAAACCGTTTCGGTTTATTCTCTGGCGAATTTGCGAAACGTCATGGGCTCCACTTAATTGGAACCACCACCACGTGGTTTCTGTTAGACATAGCGTTTTACAGCCAAAATCTCTTCCAGAAAGACATTTTCACCGCCATTGAATGGCTTCCATCGGCGGCGACGATGAGCGAATTAGAAGAATGCTTCAAAATCGCACGTGCTCAGACACTAATTGCCCTTTGCGGGACAGTTCCAGGTTACTGGTTCACGGTGGCGCTCATCGATTACTTGGGGAGATTTTTTATTCAATTGATGGGATTCATAATGATGACGATCTTCATGTTTGCTCTGGCGTTTCCTTACAATCATTGGAAGGAGAAGCCTCACAGAATCGGGTTCGTGGTGATGTATTCGTTGACGTTTTTCTTTGCGAATTTCGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACATGTCATGGGATATCGGCGGCGGCGGGAAAAGCAGGGGCAATAGTGGGAGCGTTTGGGTTTTTATATGCAGCGCAGAGTAAGGATCCGAAACTGACGGATCCGGGCTACCCGACGGGGATCGGAGTGAAGAATGCTTTGATTGTGTTGGGATGTGTAAATTTCTTGGGGGCATTGTTTACTCTGTTAGTGCCGGAATCGAAAGGGAAGTCATTGGAGGAGCTGACAGGGGAGAATGACGGGAAGGACAGGAATGGGAATACCATTGCAAATATACCTACCGATGTAAATGTCTAA 1614 51.05 MSQQVGVLNALDIAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIPNSPRPGSLPPNIAAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGITLILMVVCSIASGLSFGNSPKAVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVSSAFNNRFPAPPYMDNPNRPTIPEADYVWRIVLMFGAIPAALTYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVQLELAEHEKTMIEPNENQNRFGLFSGEFAKRHGLHLIGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPSAATMSELEECFKIARAQTLIALCGTVPGYWFTVALIDYLGRFFIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKLTDPGYPTGIGVKNALIVLGCVNFLGALFTLLVPESKGKSLEELTGENDGKDRNGNTIANIPTDVNV 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8381823 8383436 + ClCG06G006970.1 Cla06g00662 274854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00662 537 CDD MFS_PhT 24 507 - -
Cla06g00662 537 Gene3D MFS general substrate transporter like domains 272 531 IPR036259 -
Cla06g00662 537 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Cla06g00662 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 528 - -
Cla06g00662 537 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 1 528 - -
Cla06g00662 537 MobiDBLite consensus disorder prediction 513 537 - -
Cla06g00662 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Cla06g00662 537 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cla06g00662 537 MobiDBLite consensus disorder prediction 521 537 - -
Cla06g00662 537 TIGRFAM 2A0109: phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cla06g00662 537 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla05g00449 Cla06g00662 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00449 Cla-Chr5:4011771 Cla06g00662 Cla-Chr6:8381823 0 dispersed
Cla05g00943 Cla-Chr5:9365619 Cla06g00662 Cla-Chr6:8381823 0 dispersed
Cla06g00662 Cla-Chr6:8381823 Cla11g01848 Cla-Chr11:32043831 1.55E-177 dispersed
Cla08g00567 Cla-Chr8:17260734 Cla06g00662 Cla-Chr6:8381823 0 transposed
Cla05g00448 Cla-Chr5:3994632 Cla06g00662 Cla-Chr6:8381823 0 wgd
Cla06g00662 Cla-Chr6:8381823 Cla07g00094 Cla-Chr7:1073527 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00662 K08176 - csv:101212412 981.859