Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g00671 | ATGAAGACAGAGTGTTCCTCTTCTTCACTGCTGCTTCTTCTTCACCCGAAATCGCGGGCCGTACATTTCCTTACTCTCTTCTCTAGGGTTTCGCTTCGCTTCGCTCCGCTTCTCATTGCTTTCCTGCTGTTTTTTCTCGGACAAGTTGTACGAATGGAAGCTACTAGGTGTTGGTTTAATAAGTTTAGATCCAAAGACAAGCCAAAGCCCTCAACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCAAGAGCACCAACTAGTGAAGATGTACCCTCAAATGTGACCAAGCAGAAGGTTGCAGCTGCCAAGCAGTACATAGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTGGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAGGAAGAGCAAAGCAACCTGCTCAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAAAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACACGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAAGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGGAAAGATACTCTAACCGAAGACGAGGCTCGGTTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCGGATAACTTACTTCTTGACAAGGACGGCCATATGAAATTATCAGATTTCGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTCAGTGGTGCTCTTCAAAGTGATGGGCGTCCTGTGGCATCAAAACGCACACAACAGGAACAACTGCAGCATTGGCAAAGGAATAGGCGGATGCTTGCTTATTCAACAGTTGGAACTCCTGATTATATTGCCCCGGAAGTTTTGTTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTACGAAATGCTTGTGGGATTCCCACCGTTTTACTCAGATGAGCCAATGTCAACTTGCAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAGCTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCACACCCGTGGTTCAAGGGCATTGAGTGGGATAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAACTTTGAGAAGTTTGAAGAGACTGAAAACGCAATTCAAACTTCATCAAAATCAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTTGTTGGTTATACGTACAAAAACTTTGAAATCATTGATGATAATCAATTGCCTGGAATCGCTGAACTGAAGAAGAAGACCGCAAAATCTAAAAGACCTTCCATCAAATCACTTTTTGATAACGAATCTGCAATGGCTAATCAACCTGTTCAAGGAAGCTTTCTGAAACTCTTGCCTCCCCAACTAGAAGTCCCTGAGAAACTGATGAGCGCCAATGAGAAGCATTCATAA | 1809 | 41.68 | MKTECSSSSLLLLLHPKSRAVHFLTLFSRVSLRFAPLLIAFLLFFLGQVVRMEATRCWFNKFRSKDKPKPSTNKESTGNARDASRAPTSEDVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENAIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKTAKSKRPSIKSLFDNESAMANQPVQGSFLKLLPPQLEVPEKLMSANEKHS | 602 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8500197 | 8508215 | + | ClCG06G007050.2 | Cla06g00671 | 274863 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g00671 | 602 | SUPERFAMILY | Protein kinase-like (PK-like) | 145 | 522 | IPR011009 | - | |
Cla06g00671 | 602 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 92 | 571 | - | - | |
Cla06g00671 | 602 | Gene3D | Phosphorylase Kinase; domain 1 | 488 | 498 | - | - | |
Cla06g00671 | 602 | Coils | Coil | 119 | 153 | - | - | |
Cla06g00671 | 602 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 289 | 301 | IPR008271 | GO:0004672|GO:0006468 | |
Cla06g00671 | 602 | Gene3D | Transferase(Phosphotransferase) domain 1 | 368 | 487 | - | - | |
Cla06g00671 | 602 | ProSiteProfiles | Protein kinase domain profile. | 170 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla06g00671 | 602 | SMART | pkinase_C_6 | 470 | 534 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cla06g00671 | 602 | SMART | serkin_6 | 170 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla06g00671 | 602 | Pfam | Protein kinase domain | 172 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla06g00671 | 602 | MobiDBLite | consensus disorder prediction | 65 | 97 | - | - | |
Cla06g00671 | 602 | Gene3D | Phosphorylase Kinase; domain 1 | 168 | 253 | - | - | |
Cla06g00671 | 602 | ProSitePatterns | Protein kinases ATP-binding region signature. | 176 | 199 | IPR017441 | GO:0005524 | |
Cla06g00671 | 602 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 92 | 571 | - | - | |
Cla06g00671 | 602 | MobiDBLite | consensus disorder prediction | 73 | 97 | - | - | |
Cla06g00671 | 602 | Gene3D | Transferase(Phosphotransferase) domain 1 | 254 | 320 | - | - | |
Cla06g00671 | 602 | CDD | STKc_NDR_like | 168 | 533 | - | - | |
Cla06g00671 | 602 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 470 | 542 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cla06g00671 | 602 | Pfam | Protein kinase C terminal domain | 488 | 532 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02478 | Cla-Chr1:38435227 | Cla06g00671 | Cla-Chr6:8500197 | 0 | dispersed | |
Cla04g01254 | Cla-Chr4:27676085 | Cla06g00671 | Cla-Chr6:8500197 | 7.63E-22 | dispersed | |
Cla04g01257 | Cla-Chr4:27694941 | Cla06g00671 | Cla-Chr6:8500197 | 7.51E-12 | dispersed | |
Cla05g01850 | Cla-Chr5:30387124 | Cla06g00671 | Cla-Chr6:8500197 | 0 | dispersed | |
Cla06g00671 | Cla-Chr6:8500197 | Cla09g00744 | Cla-Chr9:7341099 | 0 | dispersed | |
Cla06g00671 | Cla-Chr6:8500197 | Cla03g01479 | Cla-Chr3:30288766 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80628 | PF00069 | Pkinase | 1.20E-65 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g00671 | K08790 | - | csv:101205120 | 1098.96 |