Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00693 ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCAGCCGCGGTGGCGACAGAACTAGCCGATTCCAGTCAGCAGTCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAACCAGTCTAGGCCGAAGCAAGGTACTGCTTGGGGCACTTCTCTGCGCAAGGTCTATACCTTTGACACCGTCGAAGAATTCTGGTGGTACGTTCTTCGATCCCCTTCTCCTTCGATGTTTAAATTGGGAGCTACCGAGAAATCGGGTTTTGAGGAGATCTGTTTCCTTCATATATGCTTATTTGATTGTATTTTACGGTGTGAGTTGTGTTCTCGTGCTTCTTTGAAGTTGAACTATGATTCTCTACCTTCGATTTGTGATTTCGGGCTTTTGTGCAGTTTGTACGATCAGTTATTCAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACCTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTCGATAACATGTGGTTGGAAACGTTGATGGCTTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGTCAGAGGCAGGACAAACTTGCCCTGTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGAAAATGGAAGGAGATTATTGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGAAGGGAGAAGTCAGCAAAAGCTCGATACAGTGTTTGA 804 47.01 MAGEVAVEGAVAAAAVATELADSSQQSHKLERKWTFWFDNQSRPKQGTAWGTSLRKVYTFDTVEEFWWYVLRSPSPSMFKLGATEKSGFEEICFLHICLFDCILRCELCSRASLKLNYDSLPSICDFGLLCSLYDQLFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8835835 8838372 - ClCG06G007220.1 Cla06g00693 274885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00693 267 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 68 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cla06g00693 267 ProSitePatterns Eukaryotic initiation factor 4E signature. 148 171 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cla06g00693 267 Gene3D RNA Cap, Translation Initiation Factor Eif4e 111 267 IPR023398 -
Cla06g00693 267 PANTHER BNAA08G29940D PROTEIN 131 259 - -
Cla06g00693 267 SUPERFAMILY eIF4e-like 22 82 IPR023398 -
Cla06g00693 267 Gene3D RNA Cap, Translation Initiation Factor Eif4e 7 99 IPR023398 -
Cla06g00693 267 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 131 259 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cla06g00693 267 PANTHER BNAA08G29940D PROTEIN 1 68 - -
Cla06g00693 267 SUPERFAMILY eIF4e-like 129 260 IPR023398 -
Cla06g00693 267 Pfam Eukaryotic initiation factor 4E 29 80 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cla06g00693 267 Pfam Eukaryotic initiation factor 4E 130 249 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00677 Cla-Chr3:8200077 Cla06g00693 Cla-Chr6:8835835 5.20E-12 dispersed
Cla06g00693 Cla-Chr6:8835835 Cla10g01281 Cla-Chr10:27640563 4.67E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00693 K03259 - csv:101208495 276.944