Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g00745 ATGCTCTTGTTTACTGAGGGCACTCTAATGTCTGCTGAATCTGCACATTCCATTGATGTTAAAAATCTGTTGCCAGCCATCATACTTATGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGAGCAAATACTACATTGGAGAGATGGACGTGTCGACGATCGCAGGACGGTCGGCATACACAACTCCAAAGCAGCCTCATTACAATGAGGATAAGACGACCGAGTTCATCATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTGGGTATCCGCTTTTACACCAAATCAACCTGA 408 46.08 MLLFTEGTLMSAESAHSIDVKNLLPAIILMVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAGRSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRFYTKST 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9907715 9909179 - ClCG06G007700.2 Cla06g00745 274937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g00745 135 SMART Cyt_b5_2 10 82 IPR001199 -
Cla06g00745 135 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Cla06g00745 135 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Cla06g00745 135 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Cla06g00745 135 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Cla06g00745 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Cla06g00745 135 Gene3D - 9 85 IPR036400 -
Cla06g00745 135 PANTHER CYTOCHROME B5 26 133 - -
Cla06g00745 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 30 85 IPR036400 -
Cla06g00745 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 27 81 IPR001199 -
Cla06g00745 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 14 82 IPR001199 -
Cla06g00745 135 PANTHER BNAC04G43300D PROTEIN 26 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00260 Cla-Chr6:3283674 Cla06g00745 Cla-Chr6:9907715 1.43E-23 dispersed
Cla06g00745 Cla-Chr6:9907715 Cla08g01049 Cla-Chr8:23164007 1.30E-20 dispersed
Cla05g00353 Cla-Chr5:3195017 Cla06g00745 Cla-Chr6:9907715 5.03E-60 wgd
Cla06g00745 Cla-Chr6:9907715 Cla07g00186 Cla-Chr7:2078753 5.64E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g00745 K23490 - csv:101213506 192.2