Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g00853 | ATGATCGCTTCTTCGATTTCTTCTTCCTCTATCTCTTTTATCGTCATCTTTGTCCCCATCTTTATCTCCATCTCTTTTTTCCAATTTAAACCCTCTTCCGATCACACCGTATTCCAAACCCTAACTCGAAACTACTCACCCGTCGATCCATCTCCGTCCAAGAACCTCACTGACGGGAACCCGGTCTTGTGGAAGAACTACATTGTTCGCTTCGTCCAATACAGGGAGGCGAAGGAGCATCGGCTCTATCTGGAATCGCGTATTAGATCGGGCGGCTGGGAATGGATCGAGAGGCGGAACCCTGCGTCCAAGTATCCGACTGATTTCGGCTTGGTGTCAATTGAGGACTCGGTGAGAGGAGAGCTGATTGAGGAGATTGAAGAATTGGAGCTTGTGAAGGATGTGAATGTAGATGCAAGTCATGTCAGGGGTTTGTTAACCGAGGATGGGGGTAGAGTTGGGGCTTTTGTCGACGGGAAGAAGCGTCCGGGGAAGATTTTCACTTCCATGTCATTTAAAGAAGGAGGTGGGGAACGTTATACGGCAATTAGCAATGCCTCTAATAGATGGGGACGGCATCTGTCAATGGAGAGATCCCAAGTTACCTCACTATTTGGAGCAGACTCTCTTTGGGCAAAAGGGTATACGGGTTCCAAAGTCAAGATGGCTATATTCGATACTGGCATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCAGGTGGAGATGAAGAATGTCTAGGCTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTCTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTTGATGCATTCAACTATGCAATTGCTACCAACATGGATGTATTAAATTTAAGCATCGGTGGGCCAGATTACTTGGATCTTCCATTTGTGGAGAAGATTTGGGAAATAACAGCAAATAATATCATCATGGTTTCTGCAATTGGAAACGATGGACCACTTTATGGGACTTTAAACAATCCTGCAGATCAGAGTGACGTCATTGGCGTTGGTGGTATTGACTACAATGATCATATTGCTTCATTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTTATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCCAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCGAGTCCTGTGGTTGCTGGTGTGGTATGTCTACTTGTTAGTATAATCCCTGAAAGCCAGCGGAAGGTTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCAAAGCTTGGTGGTCCTAATATGTATGAGCAAGGAGCTGGCAGAGTTGATCTGTTAGAATCGTATGAAATACTTAAGAGCTACCAACCCCGGGCGAGCATCTTCCCCGCTGTTCTTGACTATACAGATTGCCCTTATATGTGGCCCTTTTGTCGCCAACCTCTTTATGCAGGTGCAATGCCTACTATTTTCAATGCCACCATTTTGAATGGGATGGGTGTAATTGGCTATGTTGAAGGTCAACCCACTTGGCATCCTTTGGATGAAGAAGGAAATCTCTTGAGTATTCACTTCACTTATTCCAAGGTCATTTGGCCTTGGACTGGTTACATTGCACTTCATATGCAAATTAAGGAAGAAGGTGCACAATTTTCTGGAGAAATTGAGGGCAATGTGACTCTAACAGTATATAGTCCTCCATCGAGAGGAGAGAAGAACCGCCAGATTAGTACTTGTGTGTTACAGCTGAAGTTAAAAGTAGTTCCCACACCTCCAAGATCAAAACGAATTTTATGGGATCAGTTTCATAATATCAAATATCCTCCTGGTTATATTCCTAGAGATTCCTTGGATGTACGCAATGACATTCTGGACTGGCATGGAGACCACCTGCATACAAATTTTCATATCATGTTTAACATGTTAAGAGATGCTGGGTACTATGTTGAAACACTTGGTTCTCCTCTTACATGCTTTGATGCTCGCCAATATGGGACACTTCTACTAGTGGATCTTGAAGACGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGACGATGTTATGATTACTGGATTGGGATTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTTTTTGATGACAACACAAGAAGCTGGTGGACACCAGTTACTGGAGGTGCAAATATTCCTGCACTCAATGATCTTTTAGCCCCATTTGGTATTGCTTTTGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAACAGAGTCGGTATGCGTCAGGAACAGATATTGTGAGGTTTCCACAAGGTGGTTATGTGCATAGTTTCCCCTTCGTTGATAGCTCAGAGAGTGGGGCGGCTCAGAGCATACTAACATCTAGCATGAGTAAGGCAGACTTTCCGATTCTTGGCCTATTAGAGGCAGGAGAAGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTGGATAGCAGTCATATGGTTACAAACTGCTATTGGCTGCTGAGAAAAATATTAGATTTTACCAGTGGAAATATTAGAGATCCAGTTCTATTCACTAAATTTTCGAAACAAAATTCACCTCTGTATCTAGAAGATAACAAACTACCATCTCGAAGAAGTGATGTAAACTTCTCTTTGTATTCTGCTGTTGCTGGAAAGGAATTGATATGCAGGAGTGATTCTAGGTTTGAAGTATGGGGAACCAAGGGATACAGTATACAGGTCAGGGGAAGAAATCGAAGGCTGCCTGGATTTCCCGTAATAGACTTGGGAAGAGGCTTGAATTCTACTCCTGAGAGTTCTTCGAGGGGACCTCCAAAGTTGATGTTAAAAAACCGAAGAGATACATATGGAAACCGATACTTAAGTTTGTTCTACCGAGATGAGCCTGACATGCCTTTGATTGTTCCTAATCATTGGCTTGTTCCTGCTGTAGTTGCATTAACAGGGCTTTTGCTCCTTTTGAGTTTTTGGCGGATTAGACAGAAGCGGCGACGACGACGCAGAGGATCTGGATCTGCACGTTTTTCGAATATATAG | 3159 | 43.08 | MIASSISSSSISFIVIFVPIFISISFFQFKPSSDHTVFQTLTRNYSPVDPSPSKNLTDGNPVLWKNYIVRFVQYREAKEHRLYLESRIRSGGWEWIERRNPASKYPTDFGLVSIEDSVRGELIEEIEELELVKDVNVDASHVRGLLTEDGGRVGAFVDGKKRPGKIFTSMSFKEGGGERYTAISNASNRWGRHLSMERSQVTSLFGADSLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSIIPESQRKVILNPASMKQALVEGAAKLGGPNMYEQGAGRVDLLESYEILKSYQPRASIFPAVLDYTDCPYMWPFCRQPLYAGAMPTIFNATILNGMGVIGYVEGQPTWHPLDEEGNLLSIHFTYSKVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRQISTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPQGGYVHSFPFVDSSESGAAQSILTSSMSKADFPILGLLEAGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIRDPVLFTKFSKQNSPLYLEDNKLPSRRSDVNFSLYSAVAGKELICRSDSRFEVWGTKGYSIQVRGRNRRLPGFPVIDLGRGLNSTPESSSRGPPKLMLKNRRDTYGNRYLSLFYRDEPDMPLIVPNHWLVPAVVALTGLLLLLSFWRIRQKRRRRRRGSGSARFSNI | 1052 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12747249 | 12753716 | - | ClCG06G008600.1 | Cla06g00853 | 275045 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g00853 | 1052 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 193 | 487 | - | - | |
Cla06g00853 | 1052 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 257 | 267 | IPR022398 | - | |
Cla06g00853 | 1052 | Gene3D | Peptidase S8/S53 domain | 194 | 485 | IPR036852 | GO:0004252|GO:0006508 | |
Cla06g00853 | 1052 | Pfam | Subtilase family | 217 | 468 | IPR000209 | GO:0006508|GO:0008236 | |
Cla06g00853 | 1052 | PANTHER | MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE | 64 | 879 | - | - | |
Cla06g00853 | 1052 | PRINTS | Subtilisin serine protease family (S8) signature | 253 | 266 | IPR015500 | - | |
Cla06g00853 | 1052 | PRINTS | Subtilisin serine protease family (S8) signature | 217 | 236 | IPR015500 | - | |
Cla06g00853 | 1052 | PRINTS | Subtilisin serine protease family (S8) signature | 420 | 436 | IPR015500 | - | |
Cla06g00853 | 1052 | CDD | Peptidases_S8_SKI-1_like | 211 | 467 | IPR034185 | - | |
Cla06g00853 | 1052 | PANTHER | PEPTIDASE S8 | 64 | 879 | - | - | |
Cla06g00853 | 1052 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 421 | 431 | IPR023828 | - | |
Cla06g00853 | 1052 | SUPERFAMILY | Subtilisin-like | 203 | 482 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00436 | Cla-Chr1:4714009 | Cla06g00853 | Cla-Chr6:12747249 | 6.24E-06 | dispersed | |
Cla06g00853 | Cla-Chr6:12747249 | Cla05g01608 | Cla-Chr5:27377695 | 8.05E-08 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g00853 | K08653 | - | csv:101222509 | 1961.04 |