Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla06g00914 | ATGGAAGATTCCTCCAAATCAGCCGATGATCGGAAGACCCGTTTCTATCACCCCTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAACTCCCCACCTCTCCCGAGCATCTCTTCTTCGAAGAAGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAACCTCCAGTACTACACCGGAATTGGCTACCTCTCCGGCGCCATTCTCGGCGGCGCCAGGGGCTCTGTCCAGGGCCTCAGGGCGGCCGAGCCCGGCGACTCTGTCAAACTCCGTGTCAATCGAGTTCTCAACGCTGGGGGCCAGCTTGGCCGGAGGGCTGGGAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCAATTGAGAGGTACTGATGATGTCTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTATAAAGCGGCTTCCGGGCCAAGATCTGCCGCCATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGGGGGAAAGCAGGCAGTTAAGAGATATGTGCCAATATAG | 552 | 56.7 | MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYVPI | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 15144866 | 15145417 | + | ClCG06G009180.1 | Cla06g00914 | 275106 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla06g00914 | 183 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 57 | 165 | - | - | |
| Cla06g00914 | 183 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 | 1 | 183 | - | - | |
| Cla06g00914 | 183 | PANTHER | TIM23 | 1 | 183 | IPR045238 | GO:0022857 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla06g00914 | Cla-Chr6:15144866 | Cla09g00073 | Cla-Chr9:688045 | 5.99E-54 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla06g00914 | K17794 | - | csv:101211511 | 315.464 |