Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01070 | ATGGAGACCATTAGAAACAGAGGGGGTTTCAGGGTTTCTGTTTGTGGCCAAGAAGAGCTCGAACAACTCTCCAGAGATGGCAGTCAGTACAGCCTTACCACTGGAATATTGCCTTCTCTTGGCGCTAGAAGCAATCGCAGAGTTAAGCTCCGGCGCTTTATCATTTCGCCTTATGACCGTCGATACAGGATTTGGGAGACTTTTCTGGTTGTTTTGGTGGTATATACTGCTTGGGTCTCGCCGTTCGAGTTTGGATTCCTTAAGAAACCCCAATCACCACTCTCTGTTACAGACAACGTGGTTAATGGATTTTTTGCTGTGGATATTGTTCTCACATTCTTTGTAGCCTACCTTGATAAAACCACCTATTTACTTGTTGATGAACCCAAGAGGATTGCTCTGAAGTACTCAAGGACATGGCTAATCTTTGATGTCATATCCACAATTCCTTCTGAACTTGCACAGAAGATTTCCCCTTCACCTCTTCGTTCTTATGGATTATTCAACATGCTTCGTCTATGGCGTCTCCGAAGAGTCAGTGCTCTGTTTTCCAGACTGGAGAAAGATAGGAACTATAACTACTTTTGGGTTCGATGTGCCAAACTCGTTTGTGTTACTCTCTTTGCAGTTCACTGTGCTGCATGCTTCTATTATCTTCTTGCTGCTCGTTATCGTGACCCGAAAAATACGTGGATTGGAGCATCTATGGAGAACTTTCTGGAACAAAGTTTGTGGATCAGATATGTCACTTCCGTTTACTGGTCTATCACTACCCTAACCACTGTTGGCTATGGCGACTTGCATCCTGTGAATACAAGGGAGATGATTTTTGACATCTTCTACATGCTTTTCAATCTTGGTTTGACGGCATACTTGATTGGAAATATGACCAACTTAGTTGTCCATGGGACCAGTAGAACCAGAAAATTCAGAGATACCATACAAGCTGCATCTAGTTTCGCCCATAGGAATCAACTTCCTGTTCGTTTGCAAGACCAAATGCTTGCACATTTGTGTCTAAAGTTCAGAACTGACTCTGAGGGATTGCAGCAGCAAGAAACTCTTGATTCCTTGCCTAAAGCAATCCGGTCGAGCATTTCACATTATCTTTTCTATTCTCTAGTAGACAAGGTCTACTTGTTTCGGGGTGTTTCAAATGACCTACTTTTTCAACTGGTTTCAGAAATGAAGGCAGAATATTTTCCTCCAAAAGAAGATGTGATTCTACAAAATGAAGCCCCAACAGATTTCTACATTCTTGTCACGGGTGCTGTGGATTTGCTAGTTCTCAAGAATGGAGTTGAACAGGCAAGTCTGCTTATTGGAGCTCTTAGATTTTTTGAATATTGGCCTGTTGGAGAGGCTAAAACTGGCGATCTTTGTGGAGAGATTGGGGTGTTATGTTATAGACCACAACTGTTTACTGTTCGTACAAAGCGTTTGAGTCAGCTGCTGCGTCTGAATCGGACGGCTTTTCTAAATATTGTTCAATCTAATGTCGGTGATGGGACCATAATCATGAACAATCTTCTTCAGCATTTGAAGGACCTGAAAGACAAGGACCCCATCATGGAAGGAGTTTTGTTGGAGACAGAGAACATGCTGGCTAGAGGCAGAATGGACCTACCACTAAGTCTTTGCTTTGCAACACTTAGAGGAGATGATTTGCTTTTACACCAGCTTTTGAAAAGAGGTCTCGATCCAAACGAATCAGACAATACCGGGAGGACTTCACTTCATATAGCAGCATCAAATGGAAATGAGAACTGTGTGCTTCTATTACTGGACTATGGAGCTGATCCCAATAGTAGAGATTCAGATGGGAGTGTGCCATTATGGGAGGCAATACTAGGTGGCCATGAGGCGGTAGTTCAGCTACTTATAGACAATGGTGCTAACCTTCGATTGGGAGATGTCGGCCACTTTGCGTGTACTGCTGCAGAGCAAAACAACCTCCAGTTGCTCAAGGAGATTATCCGATATGGAGGAGATGTTACGAGTGCCAGGAACAATGGAACGACAGCTTTACATGTTGCTGTTTGTGAGGACAACATTGAGATTGTCAAGTTTCTTCTCAAACAAGGTGCTGATATTGATAAACCAGATGTCCATGGATGGACTCCAAGAGATCTAGCTGACCAACAGGGACATGAAGAAATTAAAATCCTCTTCCAAACAACAAAAGAGTCAAAAACTCAATCTGTCCTTGCAATTCCTGTACCGGAGAAGCAGACAGGGATTCGCTTCCTTGGAAGATTTACAAGTGAGCCTATGATTCGTCCTCAACCTCAGGAAGCAAATGACGGTTCATGGCCGGGTCAATCACGTCCCCGGCGTAGGACTAACAACTTCCATAATTCATTGTTTGGTATCATGTCAGCAGCACACTCAGGGGAGAAAGACATTCCTTTTCCTGATAACCAAACCTGTGGACAGAACTCTCGAACCAACCCTGCAAGGGTGATAATCAGCTGTCCAGAGATCGGCGAAGTTAGCGGGAAGTTGGTGCTGCTTCCAGAAAGCTACAACAAGCTGCTCGAGATTGGTGTCAAGAAATATGGGATTATGGCAACAAAGGTATTGAACAAAGATGGAGCTGCCATTGAAGATATAGAGGTGATTAGGGATGGTGATCATCTTATTTTTGTCAGTGATGGAAGGACCTCATAA | 2670 | 43.45 | METIRNRGGFRVSVCGQEELEQLSRDGSQYSLTTGILPSLGARSNRRVKLRRFIISPYDRRYRIWETFLVVLVVYTAWVSPFEFGFLKKPQSPLSVTDNVVNGFFAVDIVLTFFVAYLDKTTYLLVDEPKRIALKYSRTWLIFDVISTIPSELAQKISPSPLRSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLVCVTLFAVHCAACFYYLLAARYRDPKNTWIGASMENFLEQSLWIRYVTSVYWSITTLTTVGYGDLHPVNTREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAHRNQLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQASLLIGALRFFEYWPVGEAKTGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTAFLNIVQSNVGDGTIIMNNLLQHLKDLKDKDPIMEGVLLETENMLARGRMDLPLSLCFATLRGDDLLLHQLLKRGLDPNESDNTGRTSLHIAASNGNENCVLLLLDYGADPNSRDSDGSVPLWEAILGGHEAVVQLLIDNGANLRLGDVGHFACTAAEQNNLQLLKEIIRYGGDVTSARNNGTTALHVAVCEDNIEIVKFLLKQGADIDKPDVHGWTPRDLADQQGHEEIKILFQTTKESKTQSVLAIPVPEKQTGIRFLGRFTSEPMIRPQPQEANDGSWPGQSRPRRRTNNFHNSLFGIMSAAHSGEKDIPFPDNQTCGQNSRTNPARVIISCPEIGEVSGKLVLLPESYNKLLEIGVKKYGIMATKVLNKDGAAIEDIEVIRDGDHLIFVSDGRTS | 889 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 23198647 | 23204378 | - | ClCG06G010760.2 | Cla06g01070 | 275262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01070 | 889 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 380 | 496 | IPR000595 | - | |
Cla06g01070 | 889 | ProSiteProfiles | Ankyrin repeat region circular profile. | 671 | 702 | - | - | |
Cla06g01070 | 889 | PANTHER | K+ TRANSPORTER 1-RELATED | 6 | 887 | - | - | |
Cla06g01070 | 889 | Gene3D | - | 63 | 301 | - | - | |
Cla06g01070 | 889 | CDD | CAP_ED | 380 | 499 | IPR000595 | - | |
Cla06g01070 | 889 | Gene3D | - | 542 | 726 | IPR036770 | - | |
Cla06g01070 | 889 | ProSiteProfiles | Ankyrin repeat profile. | 671 | 703 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | SUPERFAMILY | Voltage-gated potassium channels | 57 | 301 | - | - | |
Cla06g01070 | 889 | Pfam | KHA, dimerisation domain of potassium ion channel | 820 | 882 | IPR021789 | - | |
Cla06g01070 | 889 | Gene3D | Jelly Rolls | 344 | 520 | IPR014710 | - | |
Cla06g01070 | 889 | PRINTS | EAG/ELK/ERG potassium channel family signature | 98 | 108 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cla06g01070 | 889 | PRINTS | EAG/ELK/ERG potassium channel family signature | 248 | 265 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cla06g01070 | 889 | PRINTS | EAG/ELK/ERG potassium channel family signature | 109 | 118 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cla06g01070 | 889 | PRINTS | EAG/ELK/ERG potassium channel family signature | 75 | 82 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cla06g01070 | 889 | PRINTS | EAG/ELK/ERG potassium channel family signature | 292 | 301 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cla06g01070 | 889 | PRINTS | EAG/ELK/ERG potassium channel family signature | 274 | 285 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cla06g01070 | 889 | SUPERFAMILY | Ankyrin repeat | 545 | 723 | IPR036770 | - | |
Cla06g01070 | 889 | Pfam | Ankyrin repeats (3 copies) | 646 | 724 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | Pfam | Ankyrin repeats (3 copies) | 546 | 636 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | ProSiteProfiles | Ankyrin repeat profile. | 574 | 606 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | MobiDBLite | consensus disorder prediction | 759 | 779 | - | - | |
Cla06g01070 | 889 | ProSiteProfiles | Ankyrin repeat profile. | 607 | 639 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | SUPERFAMILY | cAMP-binding domain-like | 305 | 514 | IPR018490 | - | |
Cla06g01070 | 889 | SMART | cnmp_10 | 380 | 511 | IPR000595 | - | |
Cla06g01070 | 889 | SMART | ANK_2a | 607 | 636 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | SMART | ANK_2a | 574 | 603 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | SMART | ANK_2a | 638 | 667 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | SMART | ANK_2a | 671 | 700 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | SMART | ANK_2a | 541 | 570 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | Pfam | Cyclic nucleotide-binding domain | 400 | 499 | IPR000595 | - | |
Cla06g01070 | 889 | PANTHER | POTASSIUM CHANNEL AKT1 | 6 | 887 | IPR045319 | GO:0005249|GO:0006813 | |
Cla06g01070 | 889 | PRINTS | Ankyrin repeat signature | 575 | 590 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | PRINTS | Ankyrin repeat signature | 687 | 701 | IPR002110 | GO:0005515 | |
Cla06g01070 | 889 | Pfam | Ion transport protein | 63 | 307 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cla06g01070 | 889 | ProSiteProfiles | Ankyrin repeat region circular profile. | 574 | 605 | - | - | |
Cla06g01070 | 889 | ProSiteProfiles | KHA domain profile. | 820 | 889 | IPR021789 | - | |
Cla06g01070 | 889 | ProSiteProfiles | Ankyrin repeat region circular profile. | 607 | 638 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00662 | Cla-Chr3:7986662 | Cla06g01070 | Cla-Chr6:23198647 | 6.34E-08 | dispersed | |
Cla03g00839 | Cla-Chr3:11191629 | Cla06g01070 | Cla-Chr6:23198647 | 8.16E-124 | dispersed | |
Cla05g01030 | Cla-Chr5:10542084 | Cla06g01070 | Cla-Chr6:23198647 | 6.64E-163 | dispersed | |
Cla05g01754 | Cla-Chr5:29374564 | Cla06g01070 | Cla-Chr6:23198647 | 0 | dispersed | |
Cla05g01774 | Cla-Chr5:29601163 | Cla06g01070 | Cla-Chr6:23198647 | 4.61E-09 | dispersed | |
Cla06g01070 | Cla-Chr6:23198647 | Cla10g01398 | Cla-Chr10:29072186 | 1.44E-14 | dispersed | |
Cla10g01890 | Cla-Chr10:34798988 | Cla06g01070 | Cla-Chr6:23198647 | 3.01E-12 | dispersed | |
Cla11g00665 | Cla-Chr11:7738343 | Cla06g01070 | Cla-Chr6:23198647 | 5.15E-10 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01070 | K21867 | - | csv:101220784 | 1663.28 |