Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01075 ATGAAATTTGCAATTGCGGCCCCTACGGCGTTGGGCGTTGGGCTTGTTGGTGTTTGTGGGTTTTGTTTATTTAAAAGCCAGAAGAGAAGCATCGTTTTAGTGCCACCGGTATGGGCGGCGGCGGTGACGGCAGCGGTGGTGATAATTGTGAGTGCAAAAATGGGTTTAATTTTATGGTGGAAGCCACGAAGAATAGAAAAGCACTTTGATAGGGAAGGAATTCGAGGCCCTCCTTATCGTTTCTTCATTGGTAATTTCAAAGAACTTGTTTCTATGATGCTTGCTGCTTCTTCTCATCCAATGCCCAATTTCTCTCATAATATTCTCCCTCGTGTTCTCTCTTTTTACCATCATTGGAAGAAAATTTACGGCTCCACCTTCTTGATTTGGTTCGGACCAATCGTTCGCGTCGCCGTCTCCGACCCGGACATGATCCGAGAAATCTTCACCACAAATTCCCACTTCTACGAGAAGAACGAAGCTCATCCTCTCGTCAAACAGCTCGAAGGCAATGGCCTCCTCACTCTCAAAGGCCAAAAATGGGCTCTCCATCGCAAACTCATTTCCCCCACTTTCCATATGGATAATCTCAGATTGTTGATTCCGTTGGTGGAGGAAAGTGTGGTGGAAATGGTGGAGAAATGGTCGGCTATGGCGGAGAGTGTTGACTCCGGTGAAGTCGAGATCGATGTTTTCGAGTGCTTCCAAACCCTAACGGAAGATGTTATTACAAAAACAGTATTTGGTAGTAGCTATGAAGATGGTAAAGCTATATTTAAGCTTCAAACTCAACAAATGATATTAGCTTCTCAAGCTTTTCAACAGGTTTTCATTCCTGGCTATAGATTTCTACCGACAAGAACGAATATAAATTCGTGGAAATTAGACAAACAAATAAGGAAATCATTGATGAAATTAATCGAGGGTCGAAAATGGAATTCAGAAAAAAAGTGGTTAATGGATGAAAAAAGGCCAAAAGATTTGTTAGGGCTGATGATTCAAGCTTCCTCCTTAAAAAATAATAATTCCATTACTGTCCACGACATCGTTGAAGAATGTAAAGGCTTCTTCTTTGCTGGCAAACAAACTACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACAGTGGCAAATTCAGGCACGTGATGAGGTCTTTAACATCTGCGGTTCACGTGCCCTCCCTTCCAAAGATGATGTCTCCAAGTTCAAAATCCTGACCATGATACTAAATGAATCCTTACGGTTATACCCACCCACGGTGGCAACAATCCGACGTGCAAAGGCTGACGTGGAGCTAGGTGGAAGAATGATCCCATGTGGCACGGAGTTTTTGATTCCAATCCTCGCCGTTCATCATGATCAAACTATTTGGGGCAACGATGCAAGCGAGTTCAACCCGGGGCGGTTCTCAGAAGGAGTGGGTCGAGCCGGAAATCACCCGGCCGGGTTTATTCCGTTTGGACTTGGGGTTCGTACTTGCATTGGCCAAAATCTAGCGGTTTTGGAAGCAAAATTAACAATGGCAATTATACTTCAACGGTTCACGTTTCGTTTGGCTCCTACTTATCAGCATGCACCAACGGTCCTGATGCTTCTCTATCCACAATATGGGGCCCCCATTATTTTTCAAAAGATACCCCTAAATTAA 1662 44.16 MKFAIAAPTALGVGLVGVCGFCLFKSQKRSIVLVPPVWAAAVTAAVVIIVSAKMGLILWWKPRRIEKHFDREGIRGPPYRFFIGNFKELVSMMLAASSHPMPNFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIVRVAVSDPDMIREIFTTNSHFYEKNEAHPLVKQLEGNGLLTLKGQKWALHRKLISPTFHMDNLRLLIPLVEESVVEMVEKWSAMAESVDSGEVEIDVFECFQTLTEDVITKTVFGSSYEDGKAIFKLQTQQMILASQAFQQVFIPGYRFLPTRTNINSWKLDKQIRKSLMKLIEGRKWNSEKKWLMDEKRPKDLLGLMIQASSLKNNNSITVHDIVEECKGFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVFNICGSRALPSKDDVSKFKILTMILNESLRLYPPTVATIRRAKADVELGGRMIPCGTEFLIPILAVHHDQTIWGNDASEFNPGRFSEGVGRAGNHPAGFIPFGLGVRTCIGQNLAVLEAKLTMAIILQRFTFRLAPTYQHAPTVLMLLYPQYGAPIIFQKIPLN 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23355972 23358962 + ClCG06G010810.2 Cla06g01075 275267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01075 553 PANTHER CYTOCHROMEA2 37 545 - -
Cla06g01075 553 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
Cla06g01075 553 PRINTS E-class P450 group I signature 348 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS E-class P450 group I signature 120 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS E-class P450 group I signature 238 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 Gene3D Cytochrome P450 58 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS P450 superfamily signature 359 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 SUPERFAMILY Cytochrome P450 106 548 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 Pfam Cytochrome P450 113 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01075 553 PANTHER CYTOCHROME P450 FAMILY MEMBER 37 545 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla06g01075 Cla11g00257 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01957 Cla-Chr5:31385796 Cla06g01075 Cla-Chr6:23355972 3.83E-143 dispersed
Cla05g01958 Cla-Chr5:31393896 Cla06g01075 Cla-Chr6:23355972 3.83E-143 dispersed
Cla06g01075 Cla-Chr6:23355972 Cla11g01668 Cla-Chr11:30297593 7.98E-07 dispersed
Cla11g00257 Cla-Chr11:2992425 Cla06g01075 Cla-Chr6:23355972 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01075 K15639 - csv:101213466 937.176