Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01108 ATGGCAGAAGAGAAAGAAGGGATTTTGTTCATAATTTTGGGAATTTTAATGATGGGTTTGCGAGTAAATGGTGAGCTGAGAAATGGGTTTTATTCTTTTTCATGTTCAAAAGCAGAGTCTATAGTGAGAAAGACAGTTGAATCGTACTGGAAAACAGATCCTACCATTGCAGCTGGGTTGTTGAGGCTTCATTTTCATGACTGTTTTGTGCAGGGATGTGATGGTTCAGTGTTGATTTCGGGTGGTTTAGCAGAGAGAAATGCTTTGCCAAACCTTGGATTAAGAGGGTTTCAAGTAATAGAAGACGCAAAAGCAGAGCTTGAAGCTGAGTGCCCTGGAGTTGTTTCTTGTGCTGATATTCTTGCTTTGGCTGCTCGTGATGCTGTTGACTTGAGTAATGGGCCAAGTTGGTCAGTGCCCACAGGAAGAAGGGATGGAAGGGTTTCTTCAAAATCCCAAGCCGAAAACTTACCTTCTCCACTCGAGTCCATTGCTGTGCACAAGGAAAAATTTGCACAAAAAGGCCTCGACGAACAAGACCTCGTTACCTTACTCGGAGCACACACGATAGGACAAACGGATTGCCTATTCTTCAGATACCGTCTACACAACTTCACAACAACAGGCAATTCAGATCCAACCATAAACCCATCATTCTTAACAGAGCTAAAAGCACTTTGCCCCAAAGATGGAGATGCAACCAAAAGGGTCGCGTTGGACAAAGACAGCCAATTCAAATTTGACCTTAGTTTCTTCAACAACATTAGAGATGGAAATGGAGTTTTGGAGTCGGACCAAAGGCTTTGGAGTGACGACTCAACCAGAAGCATTCTCCAAAAGTACATCAGCCCCTTAAGAGGACTTTTAGGCCTTAGATTTGACTACAACTTTAGGAAATCAATGATTAAGATGAGTAGCATTGAGGTCAAGACCGGTACGCAAGGAGAGATTAGGAGAAAATGTTCGAGGTTTAATTAG 978 42.64 MAEEKEGILFIILGILMMGLRVNGELRNGFYSFSCSKAESIVRKTVESYWKTDPTIAAGLLRLHFHDCFVQGCDGSVLISGGLAERNALPNLGLRGFQVIEDAKAELEAECPGVVSCADILALAARDAVDLSNGPSWSVPTGRRDGRVSSKSQAENLPSPLESIAVHKEKFAQKGLDEQDLVTLLGAHTIGQTDCLFFRYRLHNFTTTGNSDPTINPSFLTELKALCPKDGDATKRVALDKDSQFKFDLSFFNNIRDGNGVLESDQRLWSDDSTRSILQKYISPLRGLLGLRFDYNFRKSMIKMSSIEVKTGTQGEIRRKCSRFN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23823089 23826233 - ClCG06G011140.1 Cla06g01108 275300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01108 325 Pfam Peroxidase 42 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PANTHER PEROXIDASE 10 323 - -
Cla06g01108 325 Gene3D Peroxidase, domain 2 158 304 - -
Cla06g01108 325 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 MobiDBLite consensus disorder prediction 135 156 - -
Cla06g01108 325 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cla06g01108 325 PANTHER PEROXIDASE 25-RELATED 10 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01108 325 Gene3D - 29 325 - -
Cla06g01108 325 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601|GO:0042744
Cla06g01108 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01108 Cla-Chr6:23823089 Cla09g01499 Cla-Chr9:29203688 1.45E-137 dispersed
Cla06g01108 Cla-Chr6:23823089 Cla06g01110 Cla-Chr6:23844443 1.26E-164 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01108 K00430 - csv:101221881 584.719