Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01110 | ATGCGGAGCTTTGTGTGCCACTGGCGGTGTCAGTGTGGGAATGTCAACATTGCAGTGTTGCGAGCGATCAAGACTAGTTTGCTGGTGAAACAACGGGGATCGACTCTGCTATCCCGACGATCGCGGCATCACTCTCCGTCAAGTGAAAGTGTGGACCCCACGGTTCAAACAGTACAACCTGAAAAGATCTATGTAAGCTTTAGATTATTGCTAATAACCAATAGAATGGGACAAACAAAAGCCATGTGGTGGAATTTTGTGACAATTCTAGTAATGGTTTTGCCTGTGAAATCTCAGCTGAGTTTTGGGTTTTACTCAAAGTCTTGTCCTAAAGTTGAGTCCATTGTTAGGTCTACCGTTGAGTCTTATTACAAGGCTGATCCCACCATTGCTGCTGGCTTGCTTAGGCTTCATTTTCATGATTGTTTTGTTCAGGGATGTGATGGTTCAGTATTGATAATGGATGAAAATGCTGAAATAAATGCAGGGCCAAATATGGGGTTAAGAGGCTTTGAAGTAGTTGATGATGCAAAATCCCAACTCGAAAGTTTGTGTCCTGGGGTTGTTTCTTGTGCAGATATTCTTGCTTTGGCTACTCGTGATGCTGTAGACTTGAGTGATGGTCCAAGTTGGTCTGTGCCCACGGGCAGAAGGGACGGGACGATTTCTATGCGTTTCCAGGCGGAAGATCTTCCTTCTCCATTTGAGCCCATCGATAACCACATACAAAAGTTTGCAGAGAAAGGCCTTACTGAAGAAGATCTTGTAACCCTAGTTGGTGGTCACACGATTGGGCAAACGGATTGCCAGCTATTCAGTTACCGTCTACAGAACTTCACAAGCACAGGGAATGCAGACCCAACCATAAGCCCATCGTTCTTGACTGAACTGAGAAGCCTGTGCCCTTTGGATGGGGATCCATTCAGAGGAGTGGCCATGGACAAGGGCAGCCAGTTGAAATTTGACAACAGTTTTTACAAGAACTTGATAGATGGGAATGGGGTTTTGGAGTCTGACCAGAGACTTTGGAGCCACCCTTCAACCAGAGACATTGTGAAGAGATATGCTGGGAATTTAAGGGGATTGTTGGGCCTTAGATTTAACTATGAGTTTAAGAAAGCTATGGTTAAGTTGAGTAGCATTGGTGTTAAGACTGGCACGCAAGGGGAGATTAGAAAAGTGTGTTACCAGTTCAATAAGCAGTGA | 1206 | 44.86 | MRSFVCHWRCQCGNVNIAVLRAIKTSLLVKQRGSTLLSRRSRHHSPSSESVDPTVQTVQPEKIYVSFRLLLITNRMGQTKAMWWNFVTILVMVLPVKSQLSFGFYSKSCPKVESIVRSTVESYYKADPTIAAGLLRLHFHDCFVQGCDGSVLIMDENAEINAGPNMGLRGFEVVDDAKSQLESLCPGVVSCADILALATRDAVDLSDGPSWSVPTGRRDGTISMRFQAEDLPSPFEPIDNHIQKFAEKGLTEEDLVTLVGGHTIGQTDCQLFSYRLQNFTSTGNADPTISPSFLTELRSLCPLDGDPFRGVAMDKGSQLKFDNSFYKNLIDGNGVLESDQRLWSHPSTRDIVKRYAGNLRGLLGLRFNYEFKKAMVKLSSIGVKTGTQGEIRKVCYQFNKQ | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 23844443 | 23847348 | - | ClCG06G011160.1 | Cla06g01110 | 275302 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01110 | 401 | Gene3D | - | 103 | 399 | - | - | |
Cla06g01110 | 401 | PANTHER | PEROXIDASE 25-RELATED | 84 | 397 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 254 | 264 | IPR019793 | - | |
Cla06g01110 | 401 | ProSiteProfiles | Plant heme peroxidase family profile. | 99 | 399 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | SUPERFAMILY | Heme-dependent peroxidases | 99 | 399 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | ProSitePatterns | Peroxidases active site signature. | 131 | 142 | IPR019794 | GO:0004601 | |
Cla06g01110 | 401 | PANTHER | PEROXIDASE | 84 | 397 | - | - | |
Cla06g01110 | 401 | Pfam | Peroxidase | 116 | 357 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Haem peroxidase superfamily signature | 207 | 219 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Haem peroxidase superfamily signature | 131 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Haem peroxidase superfamily signature | 254 | 269 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Haem peroxidase superfamily signature | 314 | 329 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Haem peroxidase superfamily signature | 189 | 206 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | CDD | secretory_peroxidase | 99 | 395 | IPR033905 | GO:0004601|GO:0042744 | |
Cla06g01110 | 401 | Gene3D | Peroxidase, domain 2 | 232 | 378 | - | - | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 188 | 198 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 207 | 222 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 253 | 265 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 109 | 128 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 312 | 327 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 328 | 345 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 133 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 169 | 182 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla06g01110 | 401 | PRINTS | Plant peroxidase signature | 373 | 386 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g01110 | Cla-Chr6:23844443 | Cla09g01499 | Cla-Chr9:29203688 | 6.14E-135 | dispersed | |
Cla09g02209 | Cla-Chr9:39723690 | Cla06g01110 | Cla-Chr6:23844443 | 8.41E-73 | dispersed | |
Cla06g01108 | Cla-Chr6:23823089 | Cla06g01110 | Cla-Chr6:23844443 | 1.26E-164 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01110 | K00430 | - | csv:101214998 | 595.119 |