Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01137 ATGGAGAAAAGGTGTGGTTGTTGGGCTGTTTTGACTCGTACTGTTTCTGGTGTTTGCAAATCCTCTGCTTCTAGAGACTCTCCAAACACCATTCCTCGAACTAGCCTAGTTTATGGTTCTGCTACTGAAACACGGTATTTAAATGCTAGCAACAGGGATCTCTGTACCTTGAATGAAGCTGAGCTGGCCTCTGGTAATGCCAATCCATCAGAATCAGATAACAAAACAGCATGCAAACTGCTTCAGTTCTCTTATCATGAGCTCAAGGCAGCAACAGGAAACTTTAGACCTGATAGTATTCTTGGGGAAGGTGGATTTGGATTTGTCTTTAAAGGATGGATTGAAGAGAATGGGACAGCCCCTGCAAAACCTGGATCAGGAATTACGGTAGCTGTTAAGAGCTTGAAACTAGATGGTCTTCAAGGCCACAGAGAATGGGTGGCTGAGGTTGCCTTTCTCGGACAACTTCACCATCCAAATCTTGTTAAGCTTATAGGTTACTGTAACGAAGATGATCTACGTTTGCTTGTTTACGAGTTTATGAGCCGTGGAAGTCTTGAGAACCATCTTTTCAGAAGGACTATACCTCTTCCATGGTCCAATAGGATCAAGATTGCCCTTGGAGCGGCGAAAGGATTGGCCTTTCTTCATAATGGCCCAGTACCTGTAATCTATAGAGATTTTAAGACATCCAATATCTTGCTTGATTCGGATTACAATGCAAAGCTTTCGGATTTTGGTTTTGCGAAAGCAGGGCCTCAAGGAGACAAAACACATGTTTCTACCAGGGTAATTGGGACATATGGCTATGCTGCTCCTGAATATGTAATGACAGGGCATCTGACATCGAAGAATGATGTTTATAGCTTCGGTGTTGTGCTTCTTGAGATCGTAACAGGGAGAAGATCCATGGACAAGAAACGTCCGAGTGGTGAACAAAACCTTGTCTCATGGGCTCGACCATATTTAGCTGATAAAAGAAAGATATATCATATAGTGGATCCCCGCTTGGAATTCAACTATTCCATAAAAGGGGTGCAAAAGGTCTCGCAGCTTGCTTGCAGTTGCCTCAGCAGGGACCCAAAACTACGTCCAACCATGGACGAAGTCGTGAAGATTCTGACTCCACTACAAGATCTCAACGACCTCGCCATCCTAACATCTCACTGCCGCTCATCTTCACAAGGGAGGCGCAAGAAGAAACCCGAAGGCCTAACCTACACCCAAAGCTTCAGAGCTTCTCCATTGAACACTGGAAAGCAGCATGTAACGTGA 1275 44.55 MEKRCGCWAVLTRTVSGVCKSSASRDSPNTIPRTSLVYGSATETRYLNASNRDLCTLNEAELASGNANPSESDNKTACKLLQFSYHELKAATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKLDGLQGHREWVAEVAFLGQLHHPNLVKLIGYCNEDDLRLLVYEFMSRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHNGPVPVIYRDFKTSNILLDSDYNAKLSDFGFAKAGPQGDKTHVSTRVIGTYGYAAPEYVMTGHLTSKNDVYSFGVVLLEIVTGRRSMDKKRPSGEQNLVSWARPYLADKRKIYHIVDPRLEFNYSIKGVQKVSQLACSCLSRDPKLRPTMDEVVKILTPLQDLNDLAILTSHCRSSSQGRRKKKPEGLTYTQSFRASPLNTGKQHVT 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24294637 24298046 - ClCG06G011450.1 Cla06g01137 275329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01137 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Cla06g01137 424 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g01137 424 PANTHER OS01G0588500 PROTEIN 55 393 - -
Cla06g01137 424 MobiDBLite consensus disorder prediction 407 424 - -
Cla06g01137 424 PANTHER OS01G0588500 PROTEIN-RELATED 55 393 - -
Cla06g01137 424 Pfam Protein tyrosine and serine/threonine kinase 99 374 IPR001245 GO:0004672|GO:0006468
Cla06g01137 424 CDD STKc_IRAK 101 377 - -
Cla06g01137 424 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Cla06g01137 424 SUPERFAMILY Protein kinase-like (PK-like) 78 385 IPR011009 -
Cla06g01137 424 Gene3D Phosphorylase Kinase; domain 1 69 180 - -
Cla06g01137 424 Gene3D Transferase(Phosphotransferase) domain 1 181 391 - -
Cla06g01137 424 MobiDBLite consensus disorder prediction 391 424 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla06g01137 Cla11g00299 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01137 Cla-Chr6:24294637 Cla09g01920 Cla-Chr9:36848973 4.19E-117 dispersed
Cla09g01795 Cla-Chr9:35478580 Cla06g01137 Cla-Chr6:24294637 2.90E-177 transposed
Cla11g00299 Cla-Chr11:3455526 Cla06g01137 Cla-Chr6:24294637 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80640 PF00069 Pkinase 4.80E-45 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01137 - - bhj:120071895 836.639