Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01266 ATGCTTCTTCCTAAACTCCTCTGTTTCATCATTCTCTCTTCTGCCTTCCTTTGCCTTTCTTATGAACCTCGAAACCCTGAAGTGGAAGCTTTGATTAATGTGAAGACAGCATTGAATGATCCGCACGGCGTTCTTAGCAATTGGGATGAGGACTCTGTGGACCCTTGTAGTTGGGCAATGATCACCTGCTCCCCTGAGAATCTTGTTATAGGATTAGGAGCTCCGAGCCAGTCTCTTTCCGGAAGCTTGTCTGGGGCGATTGGGAACCTCACAAATCTTCGCCAAGTGCTGCTGCAGAATAACAACATTTCTGGTCCAATTCCCATTGAACTTGGAACTCTCCCATTGCTTCAAACATTAGATCTCTCAAACAACCGGTTCTCCGGCCCAATACCAGCATCTTTTTCTCAGCTAAACGGTCTACGCTACCTGAGGTTGAACAATAATAGCTTGTCCGGGCCTTTTCCCTTGTCTTTGGCCAAAATCCCTCAGCTTGCTTTCTTGGACTTGTCTTTTAACAATCTCAGTGGACCAGTGCCTGTGTTTCCAGCCAGAACATTCAATGTGGTGGGAAATCCTATGATATGTGGAAGTGGTCCTAATGAAGGTTGCTCTGGCTCAGCCAATGCTGTTCCTCTTTCTTTCTCTCTAGAATCATCCCCTGGAAGACTTAGATCCAAAAGAATAGCAGTGGCACTTGGGGTCAGCCTCAGTTGTGCTTTTCTGATTCTCTTAGCACTTGGAATTCTTTGGCGCAGAAGAAATCAGAAGACCAAAACCATCTTAGACATCAATGTACACAATCATGAAGTTGGACTTGTGCGCTTAGGCAACCTGAGAAACTTTAGTTTCAAGGAGCTCCAGTTAGCAACAGACCATTTTAGTTCCAGAAATATACTCGGGGCTGGAGGCTTTGGTAATGTGTACAAGGGAAAGCTAGGAGATGGGACTATGGTGGCAGTCAAACGGCTAAAAGATGTAACGGGTACCACTGGAGAGTCCCAGTTTCGCACAGAATTGGAGATGATTAGCCTTGCAGTTCATCGCAATTTGCTTCGATTAATTGGTTATTGCGCCACTTCTCACGAGAGGCTCTTGGTGTACCCATACATGTCAAATGGCAGTGTAGCTTCCAGGCTCAGAGGTAAACCAGCCTTGGACTGGAACACGAGGAAGAGAATAGCAATTGGAGCTGCAAGAGGTCTGCTGTACCTCCATGAGCAATGTGATCCTAAGATAATCCATAGAGATGTGAAGGCTGCCAATGTGCTTCTAGATGACTACTGCGAAGCCGTAGTCGGTGATTTTGGACTTGCAAAGCTTCTTGACCATGCTGACTCTCATGTAACCACTGCTGTTCGTGGCACCGTTGGGCACATCGCTCCAGAGTATCTTTCAACTGGCCAATCTTCTGAGAAGACTGATGTGTTTGGGTTTGGCATTCTTTTAATAGAGCTAATTACTGGAATGAGAGCTCTTGAATTTGGGAAGACAATTAACCAAAAAGGCGCCATGCTTGAGTGGGTGAAAAAGATACAACAGGAAAAGAAAGTGGGATTGCTTGTGGACAGAGAACTAGGCAACAACTATGATCAGATCGAAGTTGGGGAAATGTTGCAAGTGGCTCTTCTTTGCACTCAGTATTTACCTGCTCATCGTCCCAAGATGTCGGAGGTGGTCCGAATGCTCGAAGGGGATGGCCTTGTGGAGAAATGGGCTGCTACCCACACTCATAATGATTTAAATGTCAACCTCTTTCATTCACGGAACAGCTGCAAAAGTACATACAACCCAACAAATGCATTGAAGAATAATGGTAATGATCGAGATCATTCAAGCATGTTAAGTTTGACAATGGACGACGACGATGACGAGCGATCGTTAGACTCCTATGCCATGGAACTTTCCGGTCCGAGATAG 1920 45.62 MLLPKLLCFIILSSAFLCLSYEPRNPEVEALINVKTALNDPHGVLSNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGSLSGAIGNLTNLRQVLLQNNNISGPIPIELGTLPLLQTLDLSNNRFSGPIPASFSQLNGLRYLRLNNNSLSGPFPLSLAKIPQLAFLDLSFNNLSGPVPVFPARTFNVVGNPMICGSGPNEGCSGSANAVPLSFSLESSPGRLRSKRIAVALGVSLSCAFLILLALGILWRRRNQKTKTILDINVHNHEVGLVRLGNLRNFSFKELQLATDHFSSRNILGAGGFGNVYKGKLGDGTMVAVKRLKDVTGTTGESQFRTELEMISLAVHRNLLRLIGYCATSHERLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLIELITGMRALEFGKTINQKGAMLEWVKKIQQEKKVGLLVDRELGNNYDQIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLVEKWAATHTHNDLNVNLFHSRNSCKSTYNPTNALKNNGNDRDHSSMLSLTMDDDDDERSLDSYAMELSGPR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25917869 25922565 + ClCG06G012720.1 Cla06g01266 275458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01266 639 Gene3D Ribonuclease Inhibitor 24 206 IPR032675 -
Cla06g01266 639 SUPERFAMILY Protein kinase-like (PK-like) 273 564 IPR011009 -
Cla06g01266 639 SUPERFAMILY L domain-like 25 189 - -
Cla06g01266 639 SMART serkin_6 294 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g01266 639 MobiDBLite consensus disorder prediction 596 613 - -
Cla06g01266 639 ProSiteProfiles Protein kinase domain profile. 294 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g01266 639 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 639 - -
Cla06g01266 639 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Cla06g01266 639 CDD TM_EGFR-like 226 259 - -
Cla06g01266 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Cla06g01266 639 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Cla06g01266 639 MobiDBLite consensus disorder prediction 596 639 - -
Cla06g01266 639 Pfam Protein tyrosine and serine/threonine kinase 297 563 IPR001245 GO:0004672|GO:0006468
Cla06g01266 639 Gene3D Transferase(Phosphotransferase) domain 1 371 582 - -
Cla06g01266 639 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 639 - -
Cla06g01266 639 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Cla06g01266 639 Gene3D Phosphorylase Kinase; domain 1 264 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02357 Cla-Chr5:35159817 Cla06g01266 Cla-Chr6:25917869 0 dispersed
Cla06g01266 Cla-Chr6:25917869 Cla08g01742 Cla-Chr8:29908666 0 dispersed
Cla06g01266 Cla-Chr6:25917869 Cla11g00478 Cla-Chr11:5471599 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80647 PF07714 PK_Tyr_Ser-Thr 9.20E-42 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01266 - - csv:101218629 1211.82