Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01317 | ATGGCAACCCTCCAAATTCGTGGCATCGAAACCGAAATCTCTGTGGAGTTTCTGGTAGATCGAATCATCGACCTTCACAAAAGCATCTCGGAGCTTGAAACCCTAAAGCCATGCAAGAAAGTGAACCTCCTCTTCACCAACCTAGTGAACTTGTGCATTTTGCCTTGCTCAATGGATGTCTCAACATTGCCACCAAATGTACAAGCCATTCGTGAGAGCCTCATAGTTCTATGTGGCCAAGCTGAAAGCTTACTCGAGTTAGAATTCTCAACTTTGCTAAGCAAAATCCCCAAACCTCTCAACAATCTCACTCTATTTCCATATTACCACAACTACGTCAAATTAGCCAACCTTGAAAACAAGATTTTGAAAGACAATGGAGTTGTCAATCCAAAGAAGGTAGCTTTTGTTGGGTCAGGTCCTTTGCCTCTAACTTCAATTATTATGGCCATGAAACACATGAAGGGCACGTATTTCGATAACTATGATATAGACAGCGTGGCGAATGATGTGGCGGGAAAGATCGTGGGATCGGACGCTGAGCTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAAAAGAAGAGCTTGGAGGATATGATTGTGTGTTTTTGGCGGCTCTTGTGGGGATGAAGAAGGAAGATAAAGTGAAGATTATAAAGCATTTAAGAAAGTATATGAAAGAAGGTGGGATTGTGGTAGTGAGAAGTGCTAAAGGAGGTAGAGCATTTTTGTACCCTGTGGTTGAAGTTGGAGATTTGGTTGGCTTTGAGATTCTCTCTATTTTTCATCCCACTGATGATGTTGTTAATTCGGTTATCTTAGTTCGCAAGCCTGTGATTATATGA | 858 | 41.96 | MATLQIRGIETEISVEFLVDRIIDLHKSISELETLKPCKKVNLLFTNLVNLCILPCSMDVSTLPPNVQAIRESLIVLCGQAESLLELEFSTLLSKIPKPLNNLTLFPYYHNYVKLANLENKILKDNGVVNPKKVAFVGSGPLPLTSIIMAMKHMKGTYFDNYDIDSVANDVAGKIVGSDAELEGRMKFWTRDIVEVKEELGGYDCVFLAALVGMKKEDKVKIIKHLRKYMKEGGIVVVRSAKGGRAFLYPVVEVGDLVGFEILSIFHPTDDVVNSVILVRKPVII | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 26548171 | 26549028 | - | ClCG06G013210.1 | Cla06g01317 | 275509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01317 | 285 | Pfam | Nicotianamine synthase protein | 15 | 282 | IPR004298 | GO:0030410|GO:0030418 | |
Cla06g01317 | 285 | PANTHER | NICOTIANAMINE SYNTHASE | 1 | 283 | - | - | |
Cla06g01317 | 285 | Gene3D | Vaccinia Virus protein VP39 | 14 | 282 | IPR029063 | - | |
Cla06g01317 | 285 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 10 | 285 | IPR004298 | GO:0030410|GO:0030418 | |
Cla06g01317 | 285 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 127 | 277 | IPR029063 | - | |
Cla06g01317 | 285 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 283 | IPR004298 | GO:0030410|GO:0030418 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01476 | Cla-Chr2:29289348 | Cla06g01317 | Cla-Chr6:26548171 | 4.36E-89 | dispersed | |
Cla06g01317 | Cla-Chr6:26548171 | Cla03g01694 | Cla-Chr3:32853900 | 1.28E-101 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01317 | K05953 | - | csv:101209464 | 484.567 |