Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01400 | ATGGAAAATGTGTGCATCGCTCTCTTCATTCTCTTAATTTCATTTTTCTCATTTGCCCTTTTCATCCTCTTCTATCGTCACAAGGCTCAATTCGCCTACCCCAACATTCCCCCGGGCAGCATCGGTTACCCGATCGTAGGGGAGACTCTACAAATGGTTGCCCACGAGAGGAACGGGCAGCCGGAGAATTTTATCTTTGAGCGCGCCGCCAAGTACAAGACGGAGATTTTCACGACTTCCGTCCTAGGGGAGCCGACCGCCGCCTTCTGCTCCGCCGCGGGGAATAAGCTTCTGTTCTCAAACGAGCAGAATTTAGTGACTCCGTGGTGGCCGAAATCTGCTGATAAAGTGTTTCCTTCTACCGTTAAGTATAATACGAATGAAGAAGCAAAGAGAACCAAGAATTTACTCCCTCAATTTATAAAGCCAGAAGCGCTTCGGCGATATGTTGGAGTGATGGACTCTATTGCTCAAAAGCACTTCGCTTCCATGTGGGAAAATAAGAAAGAAATCGTCGTCGTTTCCACTCTAAAAGATTATACGTTCTCCCTTGCATGTCGATTGTTCATGAGCATGGAGGATGTAAACGAGGTGCAAAGAATCTTCAAGAGGTTTGAAGAGATAGCGTCAGGGATTATATCAGTACCGATAGATTTTCCGGGATCAATGTTCAGGAAAGCCATAAAAGCATCGGAGTTTGTGAGGAAGGAGCTGTTGGGGATCATAAGGCAGCGAAAAACAGATCTAGGCGAAGGGAAGGCATCAGCGACACAAGACATTCTATCACACATGCTTTTGGCCATTGACAGCAATGGCCAATTCATTCATGAAGAAGATATTGCCGCTAAAATTCTTGGTCTACTCGTCGGTGGACACGATACCGGCGTCTGTACTTGCACTTTCGTTGTCAAGTACTTGGCTGCTCTTCCCCACGTCTACGAAAATGTCTACAATGAGCAAATGGAGATAGCAAGATCAAAGACAGCAGGTGAACTATTGACTTGGGAAGATCTTCAGAAGATGAAGTATTCATGGAATGTAGTTTGTGAAGTGCTTAGACTCTTCCCTCCAGTTCAAGGAGCTTTCAGGGTTGCCCTCACTGACTTTGTCTTTAATGGCTTCTATATCCCCAAGGGCTGGAAGTTGTATTGGAGTGCGGCAGCAACACACAAAAACGCAGAGTACTTTGCGGAGCCATTAAAGTTCGAGCCAAAGAGGTTCGAAGGGAAAGGTCCGGCTCCGTTCACGTACGTGCCGTTCGGGGGTGGTCCAAGAATGTGCCCCGGCAAAGAGTACGCGCGGCTCGAGGTCCTTGTTTTCATGCACCATTTGATCAAGCGTTTCAGACTCCAACTTTGCATTCCCCATGAAGAGGTCACCGCCAATCCCATTCCCACTCCCCTCCAAGGCCTTCCGGTTCGTCTCTTTCCCCACGCGCCGCCGCCCCATTATTCTTCGTCCCCCTAA | 1467 | 48.06 | MENVCIALFILLISFFSFALFILFYRHKAQFAYPNIPPGSIGYPIVGETLQMVAHERNGQPENFIFERAAKYKTEIFTTSVLGEPTAAFCSAAGNKLLFSNEQNLVTPWWPKSADKVFPSTVKYNTNEEAKRTKNLLPQFIKPEALRRYVGVMDSIAQKHFASMWENKKEIVVVSTLKDYTFSLACRLFMSMEDVNEVQRIFKRFEEIASGIISVPIDFPGSMFRKAIKASEFVRKELLGIIRQRKTDLGEGKASATQDILSHMLLAIDSNGQFIHEEDIAAKILGLLVGGHDTGVCTCTFVVKYLAALPHVYENVYNEQMEIARSKTAGELLTWEDLQKMKYSWNVVCEVLRLFPPVQGAFRVALTDFVFNGFYIPKGWKLYWSAAATHKNAEYFAEPLKFEPKRFEGKGPAPFTYVPFGGGPRMCPGKEYARLEVLVFMHHLIKRFRLQLCIPHEEVTANPIPTPLQGLPVRLFPHAPPPHYSSSP | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 27533301 | 27538062 | + | ClCG06G014100.2 | Cla06g01400 | 275592 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01400 | 488 | Gene3D | Cytochrome P450 | 26 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | Pfam | Cytochrome P450 | 37 | 453 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | P450 superfamily signature | 418 | 427 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | E-class P450 group I signature | 417 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PRINTS | E-class P450 group I signature | 427 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla06g01400 | 488 | PANTHER | CYTOCHROME P450 26 | 9 | 476 | - | - | |
Cla06g01400 | 488 | PANTHER | BETA-AMYRIN 28-OXIDASE-LIKE | 9 | 476 | - | - | |
Cla06g01400 | 488 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 420 | 429 | IPR017972 | GO:0005506|GO:0016705 | |
Cla06g01400 | 488 | SUPERFAMILY | Cytochrome P450 | 31 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g01495 | Cla-Chr5:24133776 | Cla06g01400 | Cla-Chr6:27533301 | 3.17E-114 | dispersed | |
Cla05g01497 | Cla-Chr5:24186335 | Cla06g01400 | Cla-Chr6:27533301 | 8.64E-107 | dispersed | |
Cla06g01400 | Cla-Chr6:27533301 | Cla05g02039 | Cla-Chr5:32102232 | 5.04E-73 | dispersed | |
Cla08g01571 | Cla-Chr8:28354854 | Cla06g01400 | Cla-Chr6:27533301 | 5.38E-42 | dispersed | |
Cla06g01400 | Cla-Chr6:27533301 | Cla03g01134 | Cla-Chr3:23523395 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01400 | K20667 | - | tcc:18589551 | 653.669 |