Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01463 | ATGGCTGATCATGATTTCACCTCCTTCCCTCTTGAAGATCCAAATTTAGAGCTCATGGCTTCTCACTTTTCTCCTTCAATTCCCAGTTTCACTCACTTTTTACCATTTTCCACTACTACTACCACTACTGATATGTTTTTCCCTTCTCACCAAACCCCACCAAATTTTCCAGAAACTACTAACTTCACTACTTCCCCTGTTTTCCCATCTCACTCTGTTTTGCCACCTGCTCCTTCCTCTGTTTCTACTCATCACTTTCATGATCTCAACAAGAGAAAATCTATGGATGTTTCAGAAAGTACTTCCGGAATTTCAACTCCTCAAGTTTCTGAAACTGGGTTCAAGACTAAATATAGCTCTGGGAAAGGGAAGAGATTGAAAGGTGTTGAGAAAGAAGAGGAGAAATCAACTAGAGAAGTGGTTCATGTTAGAGCTAGAAGAGGCCAAGCCACTGATAGCCACAGCTTGGCAGAAAGGGTGAGAAGAGGAAAAATCAATGAAAGACTAAGATGCTTGAAAGACATTGTCCCAGGTTGCTACAAGACCATGGGTATGGCAGTAATGTTGGATGAGATAATTAATTATGTCCAGTCTCTGCAGAATCAAGTGGAGTTCCTCTCCATGAAACTTGCTGCAGCTAGCTCTTTCTATGACTTTAACTCAGAGGCAGATACCATATCAAAATTACAGAAGGCAAAGGCACATGAAGCAAAAGAATTGGAGAGATTGATGAGAGAAGGATATGGAGGAATAGCTTGCTTCCACTCAAATCTGCCCCTTTGA | 783 | 41.25 | MADHDFTSFPLEDPNLELMASHFSPSIPSFTHFLPFSTTTTTTDMFFPSHQTPPNFPETTNFTTSPVFPSHSVLPPAPSSVSTHHFHDLNKRKSMDVSESTSGISTPQVSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADTISKLQKAKAHEAKELERLMREGYGGIACFHSNLPL | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 28183341 | 28186563 | + | ClCG06G014740.1 | Cla06g01463 | 275655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01463 | 260 | MobiDBLite | consensus disorder prediction | 93 | 155 | - | - | |
Cla06g01463 | 260 | Coils | Coil | 226 | 246 | - | - | |
Cla06g01463 | 260 | SMART | finulus | 155 | 205 | IPR011598 | GO:0046983 | |
Cla06g01463 | 260 | PANTHER | TRANSCRIPTION FACTOR BEE 1 | 6 | 259 | - | - | |
Cla06g01463 | 260 | MobiDBLite | consensus disorder prediction | 96 | 117 | - | - | |
Cla06g01463 | 260 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 6 | 259 | IPR024097 | GO:0006355 | |
Cla06g01463 | 260 | Pfam | Helix-loop-helix DNA-binding domain | 153 | 200 | IPR011598 | GO:0046983 | |
Cla06g01463 | 260 | Gene3D | - | 146 | 217 | IPR036638 | GO:0046983 | |
Cla06g01463 | 260 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 149 | 199 | IPR011598 | GO:0046983 | |
Cla06g01463 | 260 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 147 | 217 | IPR036638 | GO:0046983 | |
Cla06g01463 | 260 | CDD | bHLH_AtBPE_like | 139 | 224 | - | - | |
Cla06g01463 | 260 | MobiDBLite | consensus disorder prediction | 123 | 155 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla04g01092 | Cla06g01463 | CCT | |
Cla04g01092 | Cla06g01463 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g01092 | Cla-Chr4:26099025 | Cla06g01463 | Cla-Chr6:28183341 | 1.52E-72 | dispersed | |
Cla06g01463 | Cla-Chr6:28183341 | Cla01g00715 | Cla-Chr1:8341695 | 6.42E-37 | dispersed | |
Cla05g01234 | Cla-Chr5:14153557 | Cla06g01463 | Cla-Chr6:28183341 | 3.29E-48 | transposed | |
Cla08g00517 | Cla-Chr8:15720437 | Cla06g01463 | Cla-Chr6:28183341 | 2.78E-52 | transposed | |
Cla04g01091 | Cla-Chr4:26084619 | Cla06g01463 | Cla-Chr6:28183341 | 6.32E-23 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61309 | PF00010 | HLH | 4.30E-05 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01463 | - | - | cmo:103494130 | 407.912 |