Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01492 ATGGATGCTCGCCGAGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACCCTCCTAATTCCCCCGACCGCACCCTCTCCGGTCCCCCCAACTGTCTCCCTTCTCAACAATCCCTATCTCCTCCCACCAATTCCTTGTCTCCGGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTTGCCTCTCGTTCTGCTGTTCTTCCTGTTCCGGCTCCCGCTAATTGGAGGAATTCCGCCGATCAGATTCCTGTTGGTAGTTATAACCCTTCCGAGACGCTGCTTGCGACGTCCCCTATGGCGTCGCCTTCCAGTAGAATTGAGGATGAAGAGCTGGAGATGTCAGAGGATTCTTCCAACTCCGTATGGTATCGCCGGAGCGGTTCTGGGAAGATTGCCTCGAGCTTTCCTGGCGTTGGAATCCACATGGCGGTTAAGTCGTTGGAGAATTCGCAGGCACTGCCTCTTCAGACGTTGGAAATTAATAAGCCTGCTGGAGTTGCAGAAAAGAATGGAGGACCATCCACGGAGGTACAGAATCGACAACCACCACCAAATACTAAACCCTTGAAGGCAAAAACAACAAAGGCTGAAAGACGAGCTCTGCAGGAGGCACAACGAGCTGCAAAAGTCTCTGCAAAAGGTGAGGCTAATAAGTCAGGTACTGCTCCTGGTAAAGCTGTGAAGCAGCCAGCAGCTATGAAAGATAGTACTGCCACACCTTCGGTTGCACCAACTGACAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGATAAAAGCAGGGTAGAAAAGGCTAAAAAACGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAACTTCCTGATCTCGTGTCAAAGTTTTTCCATCTTGACCCCATTCATCCTGCAATTTACAAGGTTGGTTTGCAATATATGGCCGGAGATATATGTGGGGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCTCTGGGTAGAGATTTAACTGCAAAAATTGGTAGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTATCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCGCATTGCCAAATTACCATTGAATCTTCCGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAAAAGATCATAATTGCAGATGAGGTCATAGTCAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTTTACTCACATATGGATCATCGTCTGCTGTAGAGATGCTTGTATTATATGCTCATGAGCTCGGAAAAGAATTTCGTGTTGTGGTGGTGGATTCCCGTCCAAAACAAGAAGGGCAAGCATTGCTTCGTAGGCTCATAGCGAGGGGCCTGAATTGTACATACACTCATATAAATGCCATTTCTTACGTGATGCATGAAGTAACTCGAGTTTTTCTAGGGGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGCTGTTGCCATGGTTGCAAATGCATTCCATGTTCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAACGAATTAGGTGATCCGGATGCTATCTCAAAGGTTCCAGAAAGGAAGGATGTTAATTATCTAGATAATCTGACCGCTAAAGATCAACTGCAACTTCTAAATTTAATGTATGACGCTACACCTTCAGATTACATCTCAATGATCGTCACAGATTATGGCATGATTCCACCTACAAGCGTGCCAGTAATCGTGCGTGAGTACCGGAGAGAGCACCTGTGGATATAA 1962 45.92 MDARRGSRIVNPKVRQVGFFTLDPPNSPDRTLSGPPNCLPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSADQIPVGSYNPSETLLATSPMASPSSRIEDEELEMSEDSSNSVWYRRSGSGKIASSFPGVGIHMAVKSLENSQALPLQTLEINKPAGVAEKNGGPSTEVQNRQPPPNTKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTAPGKAVKQPAAMKDSTATPSVAPTDKRGGDRTLDKERKKDAPPPRMQFDDKSRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFHLDPIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGSYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSSAVEMLVLYAHELGKEFRVVVVDSRPKQEGQALLRRLIARGLNCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPERKDVNYLDNLTAKDQLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28480294 28485526 - ClCG06G015080.1 Cla06g01492 275684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01492 653 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 653 - -
Cla06g01492 653 MobiDBLite consensus disorder prediction 255 283 - -
Cla06g01492 653 Gene3D - 439 646 IPR042529 -
Cla06g01492 653 MobiDBLite consensus disorder prediction 17 63 - -
Cla06g01492 653 MobiDBLite consensus disorder prediction 172 283 - -
Cla06g01492 653 Pfam Initiation factor 2 subunit family 345 636 IPR000649 GO:0044237
Cla06g01492 653 SUPERFAMILY NagB/RpiA/CoA transferase-like 300 646 IPR037171 -
Cla06g01492 653 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 653 - -
Cla06g01492 653 MobiDBLite consensus disorder prediction 179 195 - -
Cla06g01492 653 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01492 Cla-Chr6:28480294 Cla09g00127 Cla-Chr9:1270848 6.63E-14 dispersed
Cla06g01492 Cla-Chr6:28480294 Cla06g01493 Cla-Chr6:28488245 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01492 K03680 - csv:101215104 1221.07