Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01493 | ATGGATGCTCGCCGAGGTTCTCGCGTCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACTCTCGACGCTCCTAATCCTCCCGGCCGCTCCCTCTCCGGTCCCGCCGACTGTGCCCCTTCTCAACAATCCCTCTCTCCTCCCACCAATTCCTTGTCTCCTGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTCGCCTCTCGCTCTGCTGTTTTTCCTGTTCCAGCTCCCGCCAATTGGAGGGATTCCGCCGATCATATTCATGTTGGCAGCTATAACCCCTCCGAAACACTGCTTGCTACGTCGCCTTCCACTAGAATTGGGGACGAAGAGCTGGACATGTCCGAGGATTCTTCCGCCTCCGTTCCATATCGCCGGAGTGGTTCCGGGAAGATTGCTTCGAGCTTTCCCGGCGTTGGAATCCACATGGCGGCTAAGTCGTCGGAGATTTCGCAGGCGCTGTTGGAACCTAATAAGGCTTTTGGAGTTGCAGAAAAGAATGGAGGGGCTTCCACAGAGGTACAAAATCGACAGTCACCATCAAATTCAAAACCCCTGAAGGCAAAAATGACAAAGGCTGAAAGACGAGCACTACAGGAGGCACAACGAGCTGCAAAAGGTGAAGCAAAGAAGCCAGGTGATGCCCCTGGTAAAGCTGTGAAGCAGCCCTCTGCAATGAGAGATAGCACTGCCACACCTTCGGTGGTATCTACTGACAAAAGAGGAGGTGATAGAACACATGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGATAAAAACAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGACCCTATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATTTACATGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCTTTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCTCTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCTCATTGCCAAACTACCATTGAATCTTCCAGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAAAAGATTATAATTGCAGATGAGGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCTTCATGTGCTGTAGAGATGCTTCTATTATATGCTCATGAGCTCGGAAAAGAATTTCGTATTGTGGTGGTGGATTCCCGTCCAAAACTAGAAGGGCAAGCATTGCTTCGTAGGCTCATAGGGAGGGGGCTAAGTTGTACATACACTCATATAAATGCTATTTCTTACGTGATGCAGAAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAACGGAACTGTATATTCAAGAGTGGGAACTGCAGCTGTTGCCATGGTTGCTAACGCATTCCATGTTCCAGTCTTAATCTGTTGTGAAGCCTATAAATTCCATGAAAGGGTACAACTTGATTCAATATGTTTCAATGAATTAGGTGATCCGGACACTATCTCAAAGGTTCCAGGAAGGAAGGATATTAATCTAGATAATTTGACTGCTAAAGAACAACTGCAACATCTAAATTTAATGTATGATGCCACGCCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGTGTGCCAGTGATCGTGCGGGAGTATCGGAGAGAGCACCTGTGGATATAAGAAGGTTGAAAATGACCCTTCATCTGGAAGGAAGCTTATTGCTTCTAGCATGA | 1962 | 45.72 | MDARRGSRVVNPKVRQVGFFTLDAPNPPGRSLSGPADCAPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVFPVPAPANWRDSADHIHVGSYNPSETLLATSPSTRIGDEELDMSEDSSASVPYRRSGSGKIASSFPGVGIHMAAKSSEISQALLEPNKAFGVAEKNGGASTEVQNRQSPSNSKPLKAKMTKAERRALQEAQRAAKGEAKKPGDAPGKAVKQPSAMRDSTATPSVVSTDKRGGDRTHDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDPIHPAIYKVGLQYMAGDLHGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNAIRFLKNLIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRIVVVDSRPKLEGQALLRRLIGRGLSCTYTHINAISYVMQKVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDTISKVPGRKDINLDNLTAKEQLQHLNLMYDATPSDYISMIVTDYGMCASDRAGVSERAPVDIRRLKMTLHLEGSLLLLA | 653 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 28488245 | 28494987 | + | ClCG06G015090.2 | Cla06g01493 | 275685 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01493 | 653 | Gene3D | - | 427 | 628 | IPR042529 | - | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 20 | 63 | - | - | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 109 | 138 | - | - | |
Cla06g01493 | 653 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 1 | 622 | - | - | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 227 | 241 | - | - | |
Cla06g01493 | 653 | PANTHER | NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN | 1 | 622 | - | - | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 36 | 51 | - | - | |
Cla06g01493 | 653 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 287 | 624 | IPR037171 | - | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 242 | 272 | - | - | |
Cla06g01493 | 653 | Pfam | Initiation factor 2 subunit family | 333 | 621 | IPR000649 | GO:0044237 | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 171 | 188 | - | - | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 190 | 217 | - | - | |
Cla06g01493 | 653 | MobiDBLite | consensus disorder prediction | 168 | 272 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g01493 | Cla-Chr6:28488245 | Cla09g00127 | Cla-Chr9:1270848 | 1.42E-11 | dispersed | |
Cla06g01492 | Cla-Chr6:28480294 | Cla06g01493 | Cla-Chr6:28488245 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01493 | K03680 | - | csv:101214144 | 1135.17 |