Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cla06g01586	ATGCCCCCACACATTTACTGTTTCTGTTCAGGTAGAATGGAGTTTCTTGGATTTCTCTTGGTGGGTCTTCTTCTTTCTTTGGGATGTCATTCTGCTCTTGGTCACAACAATGGAGGAGGTTGGATCGATGCTCACGCCACATTCTACGGTGGGGGCGACGCCGCTGGTACAATGGGAGGGGCTTGTGGCTATGGAAATCTGTACAGCCAGGGATATGGGACGAACACGGCAGCTCTGAGTACAGCCTTATTCAACAATGGACTGAGCTGTGGCGCTTGCTTTGAAATCAGATGTGTAAATGATGCAAAATGGTGTCTTCCAAACTCCATTGTCGTTACTGCTACGAACTTTTGTCCGCCGAACAATGCGCTCCCCAACAACGCCGGCGGCTGGTGCAACCCTCCCCAACACCATTTTGATCTCTCCCAACCCGTGTTCCAGCAAATCGCTCATTACAAAGCCGGCATTGTTCCAGTGGCATATAGAAGGGTGTCTTGTGAGAAGAAAGGAGGCATTAGATTCACTATCAATGGTCATTCTTACTTCAATTTAGTTCTTGTAACCAACGTTGGGGGAGGTGGGGATGTCCATGGCGTGTGGATCAAAGGGTCGAAAACAGGGTGGGAAGCAATGTCGAGGAACTGGGGACAGAATTGGCAGAGCAATTCATATTTGAATGGACAGAGTTTGTCGTTCAAAGTGATGACCGGCGATGGCCGGACGGTGATATCCAACGACGTGGCGCCAGCTGGGTGGAGCTTTGTATTTTTAGTTTGTGAGTTTGAAAATGTGGGGTTTGGTTTGAAGGTTCTGCTGTGTCAAAATTCAAAAGGCTGTATTGAGAGAAGTCTTGTAAATCCAGCTCTTTTGATAGCTACTCTACTTTTAGACACGAGTATAAAATTAAAATTTATGAATGTTGATATTGGAGAATACGAAGACCCGTCCACTCCAAAACTCCCGACCAATTTCCAGCCGTTAGATCGTGAAAATCTCGTAAATCAACCCTCAGATCTGAAGAGAAACCATTCAGGAGAGATGGCCACTGTCACTACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCCAGATTCCTTTCTGGTTCTTCCGGTAAACTCCACCGTGAGCTCTCGGTTAAACCAGTCTCTGCTTCGTCGTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAATGGTTGCCTGGTCTGCCATCTCCGGCGTACTTAAATGGCAGTCTTCCGGGCGACAATGGATTTGACCCACTGGGTTTAGCGGAAGACCCAGAGAATTTGAGGTGGTTCGTACAAGCGGAGCTGGTGAATGGGCGGTGGGCTATGCTGGGTGTCGCCGGAATGCTTTTGCCGGAGGTTTTCACGAAGATCGGAATTATCAACGCCCCTCAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTGATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGCAGATGGCAAGACATTAAAAACCCTGGCTGCGTTAACCAAGACCCCATTTTCAAGCAATACAGTTTGCCCCCAAATGAATGTGGTTACCCGGGTGGGATTTTCAATCCCCTGAATTTTGCCCCCACTCTTGAAGCCAAAGAGAAGGAATTAGCCAATGGGAGACTTGCGATGTTGGCGTTCTTGGGATTCATTGTGCAACACAATGTGACAGGGAAGGGGCCATTTGACAACCTATTGCAGCACATTTCAGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAA	1797	48.53	MPPHIYCFCSGRMEFLGFLLVGLLLSLGCHSALGHNNGGGWIDAHATFYGGGDAAGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCVNDAKWCLPNSIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPVFQQIAHYKAGIVPVAYRRVSCEKKGGIRFTINGHSYFNLVLVTNVGGGGDVHGVWIKGSKTGWEAMSRNWGQNWQSNSYLNGQSLSFKVMTGDGRTVISNDVAPAGWSFVFLVCEFENVGFGLKVLLCQNSKGCIERSLVNPALLIATLLLDTSIKLKFMNVDIGEYEDPSTPKLPTNFQPLDRENLVNQPSDLKRNHSGEMATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN	598

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
6	29404223	29410247	+	ClCG06G016130.2	Cla06g01586	275778

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cla06g01586	598	Gene3D	Chlorophyll a/b binding protein domain	409	588	-	-
Cla06g01586	598	PRINTS	Expansin signature	129	146	IPR002963	GO:0009664
Cla06g01586	598	PRINTS	Expansin signature	217	238	IPR002963	GO:0009664
Cla06g01586	598	PRINTS	Expansin signature	146	159	IPR002963	GO:0009664
Cla06g01586	598	PRINTS	Expansin signature	110	120	IPR002963	GO:0009664
Cla06g01586	598	PRINTS	Expansin signature	98	109	IPR002963	GO:0009664
Cla06g01586	598	PRINTS	Expansin signature	182	203	IPR002963	GO:0009664
Cla06g01586	598	PRINTS	Expansin signature	71	85	IPR002963	GO:0009664
Cla06g01586	598	PRINTS	Expansin signature	170	182	IPR002963	GO:0009664
Cla06g01586	598	Gene3D	-	169	256	IPR036749	-
Cla06g01586	598	ProSiteProfiles	Expansin, family-45 endoglucanase-like domain profile.	59	171	IPR007112	-
Cla06g01586	598	SUPERFAMILY	PHL pollen allergen	168	254	IPR036749	-
Cla06g01586	598	Pfam	Expansin C-terminal domain	172	249	IPR007117	-
Cla06g01586	598	SUPERFAMILY	Chlorophyll a-b binding protein	399	595	-	-
Cla06g01586	598	PRINTS	Expansin/Lol pI family signature	80	98	IPR007118	GO:0005576
Cla06g01586	598	PRINTS	Expansin/Lol pI family signature	154	170	IPR007118	GO:0005576
Cla06g01586	598	PRINTS	Expansin/Lol pI family signature	40	55	IPR007118	GO:0005576
Cla06g01586	598	PRINTS	Expansin/Lol pI family signature	208	222	IPR007118	GO:0005576
Cla06g01586	598	PRINTS	Expansin/Lol pI family signature	58	76	IPR007118	GO:0005576
Cla06g01586	598	PRINTS	Expansin/Lol pI family signature	246	260	IPR007118	GO:0005576
Cla06g01586	598	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	347	598	IPR001344	GO:0009765\|GO:0016020
Cla06g01586	598	SUPERFAMILY	Barwin-like endoglucanases	40	189	IPR036908	-
Cla06g01586	598	Pfam	Chlorophyll A-B binding protein	409	568	IPR022796	-
Cla06g01586	598	SMART	dpbb_1	76	161	IPR007112	-
Cla06g01586	598	ProSiteProfiles	Expansin, Cellulose-binding-like domain profile.	181	254	IPR007117	-
Cla06g01586	598	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	347	598	-	-
Cla06g01586	598	Gene3D	-	28	167	IPR036908	-
Cla06g01586	598	Pfam	Lytic transglycolase	76	161	IPR009009	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cla06g01586	K08910	LHCA4; light-harvesting complex I chlorophyll a/b binding protein 4	-	csv:101222701	496.508

WGDs- Genes

Select	Gene_1	Gene_2	Event_name
	Cla04g01190	Cla06g01586	CCT
	Cla04g01190	Cla06g01586	ECH

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Cla06g01586	Cla-Chr6:29404223	Cla11g00693	Cla-Chr11:8177039	1.42E-125	dispersed
Cla08g01570	Cla-Chr8:28351845	Cla06g01586	Cla-Chr6:29404223	1.33E-62	dispersed
Cla09g02009	Cla-Chr9:37651864	Cla06g01586	Cla-Chr6:29404223	4.14E-44	dispersed
Cla11g01337	Cla-Chr11:26824719	Cla06g01586	Cla-Chr6:29404223	2.88E-73	transposed
Cla04g01190	Cla-Chr4:27061578	Cla06g01586	Cla-Chr6:29404223	9.41E-74	wgd
Cla05g02431	Cla-Chr5:35815273	Cla06g01586	Cla-Chr6:29404223	4.40E-130	wgd
Cla06g01586	Cla-Chr6:29404223	Cla09g01772	Cla-Chr9:35114897	3.79E-127	wgd

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi17g566	Blo04g00773	.	Bda06g00542	Bda15g00608	Bpe12g00541	.	.	Bma12g00994	.	.	.	Cma11g00139	Car10g00187	Car11g00156	.	.	Cpe04g01495	.	.	.	.	.	.	.	Cla06g01586	Cam06g1755	Cec06g1811	Cco06g1814	Clacu06g1721	Cmu06g1664	Cre06g2478	Cone2ag0840	Cone16ag0175	.	.	Lsi02g00081	Csa01g00560	Chy12g01533	Cme12g01983	Blo13g00003	Blo15g00312	.	.	Bpe07g00779	.	.	Bma08g00227	Sed08g2078	Cmo10g00213	Cmo11g00172	.	.	.	.	.	Cpe18g00788	Bhi08g01147	Tan05g2431	Cmetu02g0368	Lac10g0087	Hepe07g2501	.	.	Cla04g01190	Cam04g1247	Cec01g1758	Cco01g1804	Clacu04g1276	Cmu04g1254	Cre01g1547	.	Csa01g00241	Chy02g02491	Cme02g01877

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cla03g00157	.	187	629	Chloroplast and Mitochondria Gene Families	AT2G28800	59.0	4.8e-131	464.9
Cla08g01713	.	72	352	Chloroplast and Mitochondria Gene Families	AT2G28800	54.5	5.2e-77	285.4
Cla08g00704	.	3	249	Chloroplast and Mitochondria Gene Families	AT1G15820	81.9	5.2e-117	417.5
Cla02g00280	.	1	265	Chloroplast and Mitochondria Gene Families	AT3G27690	88.7	1.1e-142	503.1
Cla02g01804	.	2	267	Chloroplast and Mitochondria Gene Families	AT3G27690	78.4	6.9e-121	430.6
Cla01g02379	.	2	265	Chloroplast and Mitochondria Gene Families	AT3G27690	77.4	3.4e-120	428.3
Cla01g02380	.	46	309	Chloroplast and Mitochondria Gene Families	AT3G27690	76.7	2.9e-119	425.2
Cla10g01121	.	1	265	Chloroplast and Mitochondria Gene Families	AT3G27690	78.0	6.5e-119	424.1
Cla10g00607	.	5	266	Chloroplast and Mitochondria Gene Families	AT3G27690	66.9	1.2e-96	350.1
Cla11g01861	.	113	329	Chloroplast and Mitochondria Gene Families	AT3G27690	51.2	1.1e-52	204.1
Cla08g00194	.	118	321	Chloroplast and Mitochondria Gene Families	AT3G27690	53.8	6.8e-52	201.4
Cla11g01337	.	3	268	Chloroplast and Mitochondria Gene Families	AT3G61470	80.9	1.3e-128	456.1
Cla03g01434	.	56	261	Chloroplast and Mitochondria Gene Families	AT3G61470	65.5	2.8e-86	315.5
Cla06g01586	CCT,ECH	368	595	Chloroplast and Mitochondria Gene Families	AT3G61470	50.8	8.7e-64	240.7
Cla09g02009	.	1	198	Chloroplast and Mitochondria Gene Families	AT3G54890	81.6	5.9e-90	327.4
Cla04g00716	.	105	382	Chloroplast and Mitochondria Gene Families	AT3G08940	82.1	7.6e-133	470.3
Cla10g02086	.	76	333	Chloroplast and Mitochondria Gene Families	AT3G08940	81.3	1.1e-118	423.3
Cla11g01861	.	48	336	Chloroplast and Mitochondria Gene Families	AT1G76570	79.2	4.6e-142	501.1
Cla03g01160	.	1	273	Chloroplast and Mitochondria Gene Families	AT1G61520	86.8	8.2e-137	483.4
Cla02g00280	.	1	265	Chloroplast and Mitochondria Gene Families	AT2G05070	89.4	3.0e-144	508.1
Cla01g02379	.	5	265	Chloroplast and Mitochondria Gene Families	AT2G05070	79.3	1.0e-120	429.9
Cla01g02380	.	49	309	Chloroplast and Mitochondria Gene Families	AT2G05070	78.6	5.2e-120	427.6
Cla02g01804	.	7	267	Chloroplast and Mitochondria Gene Families	AT2G05070	78.9	6.8e-120	427.2
Cla10g01121	.	27	265	Chloroplast and Mitochondria Gene Families	AT2G05070	84.5	1.7e-118	422.5
Cla10g00607	.	7	266	Chloroplast and Mitochondria Gene Families	AT2G05070	68.0	3.6e-97	351.7
Cla03g00652	.	27	256	Chloroplast and Mitochondria Gene Families	AT2G05070	50.4	2.1e-52	203.0
Cla08g00194	.	118	321	Chloroplast and Mitochondria Gene Families	AT2G05070	54.3	4.6e-52	201.8
Cla11g01861	.	113	329	Chloroplast and Mitochondria Gene Families	AT2G05070	50.2	3.0e-51	199.1
Cla02g00280	.	1	237	Chloroplast and Mitochondria Gene Families	AT2G05100	89.5	1.7e-125	446.0
Cla01g02379	.	5	237	Chloroplast and Mitochondria Gene Families	AT2G05100	76.9	5.8e-102	367.9
Cla01g02380	.	49	281	Chloroplast and Mitochondria Gene Families	AT2G05100	76.4	1.7e-101	366.3
Cla02g01804	.	7	239	Chloroplast and Mitochondria Gene Families	AT2G05100	76.9	5.0e-101	364.8
Cla10g01121	.	27	237	Chloroplast and Mitochondria Gene Families	AT2G05100	83.4	1.9e-100	362.8
Cla10g00607	.	7	238	Chloroplast and Mitochondria Gene Families	AT2G05100	67.6	5.1e-82	301.6
Cla08g00194	.	118	305	Chloroplast and Mitochondria Gene Families	AT2G05100	53.1	1.6e-43	173.7
Cla04g00716	.	105	264	Chloroplast and Mitochondria Gene Families	AT2G40100	72.0	9.7e-65	243.4
Cla10g02086	.	76	229	Chloroplast and Mitochondria Gene Families	AT2G40100	66.7	2.4e-55	212.2
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT1G29930	88.4	1.8e-136	482.3
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT1G29930	88.8	4.0e-136	481.1
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT1G29930	88.4	6.8e-136	480.3
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT1G29930	84.9	1.7e-126	449.1
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT1G29930	78.3	3.5e-116	414.8
Cla10g00607	.	1	266	Chloroplast and Mitochondria Gene Families	AT1G29930	65.2	1.0e-94	343.6
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT1G29930	57.1	1.2e-68	256.9
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT1G29920	88.1	6.8e-136	480.3
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT1G29920	88.4	1.5e-135	479.2
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT1G29920	88.0	2.6e-135	478.4
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT1G29920	84.9	2.2e-126	448.7
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT1G29920	77.9	2.1e-116	415.6
Cla10g00607	.	1	266	Chloroplast and Mitochondria Gene Families	AT1G29920	65.2	1.7e-94	342.8
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT1G29920	56.8	4.7e-68	255.0
Cla08g00194	.	101	321	Chloroplast and Mitochondria Gene Families	AT1G29920	50.7	7.2e-53	204.5
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT1G29910	88.1	6.8e-136	480.3
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT1G29910	88.4	1.5e-135	479.2
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT1G29910	88.0	2.6e-135	478.4
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT1G29910	84.9	2.2e-126	448.7
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT1G29910	77.9	2.1e-116	415.6
Cla10g00607	.	1	266	Chloroplast and Mitochondria Gene Families	AT1G29910	65.2	1.7e-94	342.8
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT1G29910	56.8	4.7e-68	255.0
Cla08g00194	.	101	321	Chloroplast and Mitochondria Gene Families	AT1G29910	50.7	7.2e-53	204.5
Cla08g00194	.	56	336	Chloroplast and Mitochondria Gene Families	AT4G10340	84.7	5.3e-139	490.7
Cla01g02380	.	81	297	Chloroplast and Mitochondria Gene Families	AT4G10340	52.9	3.9e-57	218.8
Cla01g02379	.	37	253	Chloroplast and Mitochondria Gene Families	AT4G10340	52.5	6.6e-57	218.0
Cla10g01121	.	49	253	Chloroplast and Mitochondria Gene Families	AT4G10340	54.1	8.6e-57	217.6
Cla02g01804	.	51	255	Chloroplast and Mitochondria Gene Families	AT4G10340	54.1	1.1e-56	217.2
Cla02g00280	.	49	253	Chloroplast and Mitochondria Gene Families	AT4G10340	52.6	3.1e-54	209.1
Cla10g00607	.	48	254	Chloroplast and Mitochondria Gene Families	AT4G10340	54.0	3.8e-52	202.2
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT2G34420	88.4	1.2e-135	479.6
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT2G34420	88.0	1.7e-134	475.7
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT2G34420	87.6	2.8e-134	474.9
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT2G34420	85.7	3.4e-127	451.4
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT2G34420	77.2	7.0e-117	417.2
Cla10g00607	.	24	266	Chloroplast and Mitochondria Gene Families	AT2G34420	70.1	8.4e-94	340.5
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT2G34420	56.8	5.1e-67	251.5
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT2G34430	88.3	8.0e-137	483.4
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT2G34430	88.3	3.0e-136	481.5
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT2G34430	88.1	2.0e-135	478.8
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT2G34430	85.6	4.7e-129	457.6
Cla02g00280	.	31	265	Chloroplast and Mitochondria Gene Families	AT2G34430	83.2	1.9e-114	409.1
Cla10g00607	.	36	266	Chloroplast and Mitochondria Gene Families	AT2G34430	70.5	8.4e-94	340.5
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT2G34430	55.9	2.3e-67	252.7
Cla04g00716	.	105	382	Chloroplast and Mitochondria Gene Families	AT5G01530	83.5	6.7e-137	483.8
Cla10g02086	.	73	333	Chloroplast and Mitochondria Gene Families	AT5G01530	84.1	2.4e-126	448.7
Cla10g00746	.	269	528	Chloroplast and Mitochondria Gene Families	AT5G40810	93.5	2.5e-143	505.0
Cla10g00746	.	233	528	Chloroplast and Mitochondria Gene Families	AT3G27240	83.5	6.8e-148	520.4
Cla02g01883	.	5	327	Chloroplast and Mitochondria Gene Families	AT2G30160	75.3	7.1e-143	503.8
Cla04g00684	.	100	402	Chloroplast and Mitochondria Gene Families	AT2G30160	64.2	9.4e-111	397.1
Cla02g01883	.	5	323	Chloroplast and Mitochondria Gene Families	AT1G07030	76.4	3.2e-143	505.0
Cla04g00684	.	96	402	Chloroplast and Mitochondria Gene Families	AT1G07030	67.5	1.7e-117	419.5
Cla09g00508	.	1	380	Chloroplast and Mitochondria Gene Families	AT2G47490	55.5	1.6e-107	386.3
Cla01g00571	.	9	374	Chloroplast and Mitochondria Gene Families	AT2G47490	52.6	4.6e-99	358.2
Cla01g00571	.	10	426	Chloroplast and Mitochondria Gene Families	AT1G25380	54.1	9.3e-112	400.6
Cla09g00508	.	73	349	Chloroplast and Mitochondria Gene Families	AT1G25380	57.0	8.8e-86	314.3
Cla03g00519	.	597	1172	Chloroplast and Mitochondria Gene Families	AT4G21490	75.6	7.3e-260	893.3
Cla02g01697	.	434	1056	Chloroplast and Mitochondria Gene Families	AT4G21490	66.2	6.6e-237	817.0
Cla02g00132	.	23	596	Chloroplast and Mitochondria Gene Families	AT4G21490	64.7	1.2e-225	779.6
Cla09g00073	.	847	1035	Chloroplast and Mitochondria Gene Families	AT1G17530	62.5	2.6e-62	235.3
Cla06g00914	.	4	179	Chloroplast and Mitochondria Gene Families	AT1G17530	57.3	1.3e-50	196.4
Cla06g00914	.	12	183	Chloroplast and Mitochondria Gene Families	AT3G04800	57.8	1.8e-50	196.1
Cla09g00073	.	871	1035	Chloroplast and Mitochondria Gene Families	AT3G04800	53.9	1.5e-41	166.4
Cla09g00073	.	864	1035	Chloroplast and Mitochondria Gene Families	AT1G72750	68.4	4.6e-62	234.6
Cla06g00914	.	5	183	Chloroplast and Mitochondria Gene Families	AT1G72750	57.1	2.5e-52	202.2
Cla05g02337	CCT	663	837	Chloroplast and Mitochondria Gene Families	AT1G26100	69.7	1.6e-67	253.1
Cla11g00506	.	1	278	Chloroplast and Mitochondria Gene Families	AT5G38630	57.7	4.4e-83	304.7
Cla09g01236	.	144	351	Chloroplast and Mitochondria Gene Families	AT4G25570	69.5	4.9e-84	308.1
Cla01g00658	.	2	225	Chloroplast and Mitochondria Gene Families	AT1G14730	50.4	2.7e-61	232.3
Cla01g00764	.	9	356	Chloroplast and Mitochondria Gene Families	AT5G14040	82.3	2.3e-169	592.0
Cla05g01339	.	10	395	Chloroplast and Mitochondria Gene Families	AT5G14040	69.8	5.0e-153	537.7
Cla06g01777	.	39	329	Chloroplast and Mitochondria Gene Families	AT5G14040	86.6	4.4e-149	524.6
Cla02g00337	.	11	297	Chloroplast and Mitochondria Gene Families	AT5G14040	52.1	1.2e-82	303.9
Cla01g00764	.	8	356	Chloroplast and Mitochondria Gene Families	AT3G48850	72.0	7.6e-146	513.8
Cla05g01339	.	11	401	Chloroplast and Mitochondria Gene Families	AT3G48850	65.1	1.8e-139	492.7
Cla06g01777	.	10	329	Chloroplast and Mitochondria Gene Families	AT3G48850	67.6	2.3e-134	475.7
Cla02g00337	.	11	297	Chloroplast and Mitochondria Gene Families	AT3G48850	50.5	3.7e-84	308.9
Cla02g00337	.	14	308	Chloroplast and Mitochondria Gene Families	AT2G17270	76.9	1.1e-132	469.9
Cla01g00764	.	62	352	Chloroplast and Mitochondria Gene Families	AT2G17270	52.6	4.8e-85	311.6
Cla06g01777	.	44	328	Chloroplast and Mitochondria Gene Families	AT2G17270	50.2	5.5e-81	298.1
Cla11g00459	.	16	343	Chloroplast and Mitochondria Gene Families	AT5G15640	68.6	4.7e-120	427.9
Cla05g00729	.	47	341	Chloroplast and Mitochondria Gene Families	AT5G15640	50.2	5.9e-78	288.1
Cla05g01857	.	12	345	Chloroplast and Mitochondria Gene Families	AT5G26200	66.8	1.2e-124	443.4
Cla09g00079	.	1	344	Chloroplast and Mitochondria Gene Families	AT5G26200	57.8	1.8e-104	376.3
Cla09g00079	.	1	348	Chloroplast and Mitochondria Gene Families	AT1G72820	75.8	2.3e-147	518.8
Cla05g01857	.	1	346	Chloroplast and Mitochondria Gene Families	AT1G72820	68.8	5.1e-131	464.5
Cla01g00235	CCT,ECH	82	285	Chloroplast and Mitochondria Gene Families	AT5G52570	52.5	2.3e-50	196.1
Cla05g00912	CCT,ECH	1	219	Chloroplast and Mitochondria Gene Families	AT4G25700	63.2	1.2e-69	260.0
Cla01g00235	CCT,ECH	31	204	Chloroplast and Mitochondria Gene Families	AT4G25700	62.2	1.5e-56	216.5
Cla02g00146	.	177	355	Chloroplast and Mitochondria Gene Families	AT4G03320	52.2	8.8e-57	217.6
Cla10g00609	.	72	359	Chloroplast and Mitochondria Gene Families	AT5G54290	79.0	9.1e-120	427.2
Cla06g01286	.	43	546	Chloroplast and Mitochondria Gene Families	AT2G18710	83.9	4.7e-240	827.4

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0001994	2	2	3	3	2	2	3	2	2	2	2	2	3	2	2	3	2	2	3	2	2	2	2	2	2	2	2	3	2	1	66

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cla06g01586	Cla_Chr06	FPKM	20.241505	20.542082	15.482434	17.120001	25.714401	25.259739	30.935822	9.012014	8.877412	9.794537