Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01611 | ATGGAAGAAAAGGGAGAGAAGCCTGAGGTTTTGGAGGCTGTATTGAAGGAAACTGTGGACTTGGAAAACATACCCATCGAGGAGGTTTTTGATAATCTGAGATGTAGCAAAGAGGGTCTTACCACAGCAGCTGCTGAGGAACGGCTTGTAATTTTTGGTCACAACAAGCTTGAGGAGAAGAAGGAAAGTAAAGTCTTGAAGTTTTTGGGGTTTATGTGGAACCCCCTCTCATGGGTAATGGAAGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGTGGAGTAAGTGCTCAGCTCTTTGGTTTGTCTTGTCATTTATCTCAGTATATGTCATCTTTACCTGACGTCCTTGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTATCGCGCTGTTGGTTATCAACTCAACAATTAGTTTTATTGAGGAAAATAATGCCGGTAACGCTGCCGCTGCTCTAATGGCGAGTTTAGCCCCCCAAGCCAAGATTCTTCGAGATGGAAGGTGGAGCGTGCAAGATGCGTCGGTTTTAGTTCCTGGTGATATTATAAGTATCAAACTTGGGGATATTATTCCAGCTGATGCGCGTCTTCTAGAGGGGGATCCATTGAAAATCGACCAGTCTGCTCTTACAGGCGAGTCTCTTCCTGTTACGAAAGGTCCAGGCGATGGCATATATTCTGGTTCTACTTGTAAGCAAGGAGAGATTGAAGCGGTGGTCATTGCCACTGGTGTTCATACTTTCTTTGGCAAGGCTGCTCACCTTGTTGACACCACTAATCAAGTGGGGCACTTCCAAAAGGTAAAGAAGGTCTTGACTGCAATCGGGAACTTCTGCATATGTTCAATTGCTGTGGGGATGATTACAGAAATTATTGTCATGTATCCAATTCAAGATCGTGAATATCGTCCTGGAATCGACAATCTTCTCGTGCTTCTAATTGGAGGAATTCCAATTGCCATGCCCACAGTCCTCTCTGTGACAATGGCTATTGGCTCTCATAGGTTATCTCAGCAGGGTGCTATCACAAAGAGGATGACTGCAATTGAAGAGATGGCAGGTATGGACGTGCTTTGCAGTGACAAAACTGGAACACTGACATTAAACAAGCTAACTGTTGATAAAAATCTTGTCGAGGTCTTTGCTAAAGGAGTGGATGTGGATACTGTGGTTCTAATGGCAGCCCGGGCATCAAGAACAGAGAACCAAGATGCTATTGATACCGCTATTGTTGGGATGCTTGCTGACCCGAAAGAGGCTCGTGCTGGTATTCAAGAAGTACACTTCCTTCCATTTAACCCTACTGATAAGCGGACTGCATTGACTTACATAGACCACGAGGGTAAAATGCATAGAGTCAGCAAAGGTGCACCAGAGCAGATTCTGAACCTTGCACACAATAAGTCGGAGATTGAGCGCAAAGTTCATGCCGTTATAGACAAGTTTGCAGAACGAGGTTTACGCTCTCTTGCTGTGGCATACCAGGAAGTTCCAGATGGTAGGAAGGAGAGTGCTGGAGGTCCATGGCAGTTTGTTGGCCTTCTGCCACTGTTTGACCCACCAAGGCATGACAGTGCAGAGACTATTAGGAGGGCCTTAAATCTTGGAGTGAACGTGAAGATGATTACCGGTGACCAGCTGGCCATTGGAAAGGAAACAGGACGTCGCTTGGGGATGGGAACCAACATGTATCCCTCATCTGCTTTATTAGGTCAGGACAAGGACGAGTCTATTGCTGCTTTACCTGTTGATGAACTGATAGAAAAAGCTGATGGCTTTGCTGGTGTTTTTCCTGAGCACAAATATGAGATTGTAAAGCGCCTGCAGGCAAGGAAACATATCTGTGGAATGACTGGCGATGGAGTAAATGATGCTCCTGCCCTTAAAAAAGCAGACATAGGGATAGCTGTCGCTGATGCTACTGATGCTGCTCGTAGTGCTTCAGACATAGTCCTTACAGAGCCCGGTCTGAGTGTTATCATTAGTGCTGTTTTGACCAGCCGAGCAATCTTTCAGAGGATGAAAAATTACACTCTTGGTTTCATGTTGCTGGCTCTCATATGGAAATTTGACTTCCCACCTTTTATGGTGCTTATCATTGCCATTCTCAATGATGTGAAACCATCTCCTTTGCCTGATAGCTGGAAGCTGGCTGAAATTTTTACAACTGGCATTATTCTTGGTGGCTACTTGGCAATGATGACTGTTATCTTCTTTTGGGCAGCCTATAAGACAAACTTTTTTCCACGAGTCTTTGGGGTGGCAACTCTGGAGAAAACTGCTCATGATGACATCAGGAAACTGGCCTCAGCAGTGTATCTGCAAGTAAGCACTATAAGTCAGGCTCTCATATTCGTTACTCGCTCTCGAAGTTGGTCTTATGTGGAACGTCCCGGGTTATTACTGGTTGCGGCTTTTCTGGTTGCACAGCTGATTGCTACTTTAATTGCTGTTTACGCAAATTGGAGCTTTGCTGCCATCGAAGGAATTGGATGGGGTTGGGCTGGTGTTATCTGGCTTTACAACATCATCTTTTACATCCCACTTGATCTCATCAAGTTCTTTATACGATATGCTTTAAGTGGGAGGGCTTGGGATCTTGTTATTGAACAGAGGATTGCCTTTACGAGGCAAAAGGATTTCGGGAAGGAACAACGGGAGCTACAATGGGCTCATGCACAAAGAACATTACATGGATTGCAAGCACCCGACGCCAAAATGTTCCACGACCGAACTCACTTCACCGAGCTCAATCAGATGGCTGAAGAAGCCAAAAGGAGAGCTGAAATTGCAAGGTTGAGGGAACTACACACCCTGAAAGGCCATGTTGAATCAGTGGTGAGGCTAAAAGGACTTGACATAGACACAATTCAGCAAGCTTACACAGTATGA | 2895 | 45.28 | MEEKGEKPEVLEAVLKETVDLENIPIEEVFDNLRCSKEGLTTAAAEERLVIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGVSAQLFGLSCHLSQYMSSLPDVLGKPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSVQDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVKKVLTAIGNFCICSIAVGMITEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFMLLALIWKFDFPPFMVLIIAILNDVKPSPLPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTNFFPRVFGVATLEKTAHDDIRKLASAVYLQVSTISQALIFVTRSRSWSYVERPGLLLVAAFLVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDLIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFHDRTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV | 964 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 29630953 | 29639064 | - | ClCG06G016430.1 | Cla06g01611 | 275803 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01611 | 964 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 115 | 944 | - | - | |
Cla06g01611 | 964 | SMART | Cation_ATPase_N_a_2 | 20 | 92 | IPR004014 | - | |
Cla06g01611 | 964 | Gene3D | - | 372 | 519 | IPR023299 | GO:0000166 | |
Cla06g01611 | 964 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 39 | 820 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cla06g01611 | 964 | Coils | Coil | 915 | 935 | - | - | |
Cla06g01611 | 964 | PANTHER | PLASMA MEMBRANE ATPASE 1 | 6 | 95 | - | - | |
Cla06g01611 | 964 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 6 | 95 | - | - | |
Cla06g01611 | 964 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 362 | 368 | IPR018303 | - | |
Cla06g01611 | 964 | Gene3D | - | 913 | 964 | - | - | |
Cla06g01611 | 964 | SFLD | Haloacid Dehalogenase | 342 | 670 | - | - | |
Cla06g01611 | 964 | SUPERFAMILY | Calcium ATPase, transduction domain A | 160 | 257 | IPR008250 | - | |
Cla06g01611 | 964 | Gene3D | - | 357 | 656 | IPR023214 | - | |
Cla06g01611 | 964 | SUPERFAMILY | HAD-like | 356 | 666 | IPR036412 | - | |
Cla06g01611 | 964 | Gene3D | - | 160 | 244 | - | - | |
Cla06g01611 | 964 | PRINTS | H+-transporting ATPase (proton pump) signature | 619 | 635 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla06g01611 | 964 | PRINTS | H+-transporting ATPase (proton pump) signature | 591 | 607 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla06g01611 | 964 | PRINTS | H+-transporting ATPase (proton pump) signature | 650 | 675 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla06g01611 | 964 | PRINTS | H+-transporting ATPase (proton pump) signature | 774 | 795 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla06g01611 | 964 | PRINTS | H+-transporting ATPase (proton pump) signature | 476 | 494 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla06g01611 | 964 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 129 | 379 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla06g01611 | 964 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 594 | 690 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla06g01611 | 964 | Pfam | E1-E2 ATPase | 158 | 339 | - | - | |
Cla06g01611 | 964 | PRINTS | P-type cation-transporting ATPase superfamily signature | 619 | 638 | - | - | |
Cla06g01611 | 964 | PRINTS | P-type cation-transporting ATPase superfamily signature | 360 | 374 | - | - | |
Cla06g01611 | 964 | PRINTS | P-type cation-transporting ATPase superfamily signature | 514 | 525 | - | - | |
Cla06g01611 | 964 | PRINTS | P-type cation-transporting ATPase superfamily signature | 207 | 221 | - | - | |
Cla06g01611 | 964 | PRINTS | P-type cation-transporting ATPase superfamily signature | 536 | 546 | - | - | |
Cla06g01611 | 964 | PRINTS | P-type cation-transporting ATPase superfamily signature | 642 | 654 | - | - | |
Cla06g01611 | 964 | Pfam | haloacid dehalogenase-like hydrolase | 356 | 633 | - | - | |
Cla06g01611 | 964 | PANTHER | PLASMA MEMBRANE ATPASE 1 | 115 | 944 | - | - | |
Cla06g01611 | 964 | SFLD | p-type atpase | 342 | 670 | IPR044492 | - | |
Cla06g01611 | 964 | Gene3D | - | 122 | 829 | - | - | |
Cla06g01611 | 964 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 20 | 861 | IPR023298 | - | |
Cla06g01611 | 964 | Pfam | Cation transporter/ATPase, N-terminus | 23 | 86 | IPR004014 | - | |
Cla06g01611 | 964 | CDD | P-type_ATPase_H | 39 | 855 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01418 | Cla06g01611 | CCT | |
Cla01g01418 | Cla06g01611 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g01611 | Cla-Chr6:29630953 | Cla08g01268 | Cla-Chr8:25581049 | 0 | dispersed | |
Cla01g01418 | Cla-Chr1:28677689 | Cla06g01611 | Cla-Chr6:29630953 | 0 | wgd | |
Cla06g01611 | Cla-Chr6:29630953 | Cla09g01799 | Cla-Chr9:35503369 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01611 | K01535 | - | csv:101217264 | 1734.92 |