Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01616 ATGGAAGTTTTTGGGTTTATGCCAAACAAATGGATTGCAACCGCCCTTGGAATTTGGATTCAATGTATCTGCGGTGCTTCCTACACCTTCAGCATCTATTCTTCCGCTCTCAAGTCCTCCCAGGCCTACGATCAATCCACCCTCGACATCGTTTCCGTTTTCAAAGACATCGGCGCCAACGCCGGCATCATTTCTGGTTTTCTTTACTCCGCCGTCACTCCCCCAGCCCCCCGCTGGGCCTTTGCCGGGCCATGGGTGGTTCACGCCGCCGGAGCGATTCAGTGCTTCCTCGGATATATATTCATATGGGCCGCTATCTCTGGAGTGATCGATCGGCCGCCGGTGCCGGCGATGTGCTTCTTCATGTTTCTGGCTGCACATGCGCAAACGTTTTTCAATACGGCGAATGTGGTAACTGGCGTGCACAATTTTGCGCACTATAGCGGGACGATTGTGGGAATCATGAAGGGATATCTTGGTCTCAGTGGAGCACTGCTAATCCAAGTTTATAATACGACTTGCAATGGAGATCCAAGCAATTTTCTCCTCATGCTGGCAGTTTTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTGTTAGAATTGACAAAACAAAGTCTAGTAATGAGATGAAGCATTTGAATTCATTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTAATGGTTGTAATCATCTTGAACAACACTTTCTCCCTTTCATCATGGACTCGTTTCTTTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGCAATCGCCATTAATGCTCAGAGGGAAGACTTTAGAGAGTCATCTCCATCATTCCTCACTGAAAAAAGTCATGTTGTTAACAAACTCAAGTCAATGGATGCAGAGGATTCTGTTGAATATCATGAGTTGCCCAGGGATGAGAGCCAGACAGTGGCTGTTTCCAACTCTAGAATTCCTCAAGCCATGAATGTCTTGGAAGCTATACGCACTATAAACTTCTGGCTGTTGTTTCTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGCCAACTTGGCCAGTCTCTTGGTTACACAGCAACAGAGACGAAGACATTTGTTTCGTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTTCTTCTCCACTCATATGGGTGGGCAAGGCCATTGTTAATGGCAATTACTCTAATGATAATGAGTGGCGGCCACATCGTGATCGCCTCCGGTTTCTCTGGAAATCTGTATGTGGGTTCAATTCTTATTGGCATATGCTATGGCTCACAATGGTCATTGATGCCTACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGTACTATTTTCAACACCATAGCCATCGCCAGCCCTTTGGGGTCTTACATTTTTTCTGTTCGAGTAATCGGTTACATTTACGACAGAGAAGCTGCCGGAGAACATGGCTCCTGCTCTGGTACACACTGTTTGTTGATATCTTTTCTTGTCATGGCCGTCGTGGCTTTCTTGGGATCTCTTGTTGTTGCTGCACTCTTCTTCCGAACCAGGAGATTTTACCGACTGGCGTTGCAAAGAAGAGTGGAATGTCTCTAA 1629 45.73 MEVFGFMPNKWIATALGIWIQCICGASYTFSIYSSALKSSQAYDQSTLDIVSVFKDIGANAGIISGFLYSAVTPPAPRWAFAGPWVVHAAGAIQCFLGYIFIWAAISGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHYSGTIVGIMKGYLGLSGALLIQVYNTTCNGDPSNFLLMLAVLPTLLSIMFMWFVRIDKTKSSNEMKHLNSLSALAVIVAFYLMVVIILNNTFSLSSWTRFFTFSILLILLAAPLAIAINAQREDFRESSPSFLTEKSHVVNKLKSMDAEDSVEYHELPRDESQTVAVSNSRIPQAMNVLEAIRTINFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLMIMSGGHIVIASGFSGNLYVGSILIGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAGEHGSCSGTHCLLISFLVMAVVAFLGSLVVAALFFRTRRFYRLALQRRVECL 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29700636 29703798 + ClCG06G016480.1 Cla06g01616 275808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01616 542 CDD MFS_Mch1p_like 10 516 - -
Cla06g01616 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 540 - -
Cla06g01616 542 Pfam Nodulin-like 10 264 IPR010658 -
Cla06g01616 542 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
Cla06g01616 542 PANTHER F25A4.25 PROTEIN 9 540 - -
Cla06g01616 542 Gene3D MFS general substrate transporter like domains 211 525 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01616 Cla-Chr6:29700636 Cla06g01618 Cla-Chr6:29708540 0 dispersed
Cla06g01616 Cla-Chr6:29700636 Cla06g01617 Cla-Chr6:29707001 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01616 - - csv:101216789 959.133