Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01631 ATGGCGACGGTTCCTGACCGCTTCCGTCGCAACCCCATCGACAGACTTGTTGGGATTTCCGACGATTCGAAACAGAGTTGTAGTTCGACGACCCAGCTTCATGTTCTTGCTGTTGATGATAGCCTCGTCGATCGGAAGGTTATTGAGCGGTTGTTGAAGATCTCGTCGTGTAAAGTTACTGCTGTTGAGAGCGGGAGAAGTGCTCTTCAGTATCTGGGTTTGGATGGGGAAAACAATTCTGTTCAGTTTAGTAGTGGTTTGAAGGTGAATCTCATCATTACAGATTACTCCATGCCTGAAATGACTGGATATGAATTGCTCAAGAAGATCAAGCTTCTTATTACACATAATCAATGGCTGAAAGAGGATTGTTATGAACAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTTTGGCTCGAATAGACAGTTGCTTGAAGGAAGGGGCTGAAGAATTCATAGTGAAGCCTGTGAAATTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGAAGGAAAGAAAATTGGGTCAAAGAGGAAGCTACATTTTGATCATGATCACGATCACCACCCGTCGTCTCCAGTTTCTCCGGCGTCATCCGCGGCAGTGTTCGACCCTTGCCATGGATTTCTGCAACGATCAGCACCGTCATTTCGACACGAAGACGAAGACAAAGGCGAAGACGAAGAGCCAAAGCAGAGAGCTTCATCGGAGCTAAGGAAAATGACTCACTCGAAGCTTGAAGACGCCACTGGTTTGAAGGAAGACCTCATCGCAGACGCCTGGGCCGCCGCCATTAAAGCTCACAAACATTCGAAGCCATTTCTCGTTGATAAAACCCGAGATTTCTCCATCATCAGCTTCGCCGGATCTTGGTCGTCCGAAGCCTGGTTCTCTGCTTCTGATTCATCTTTCGGAGAAACAAAGATCGACACTCGGCTGTTTCCATCCGTCAGGAGCATCGGCGTCGACGATTATGCAGTCGTCAACTCTGCATTTTTCCAGAAATTTGAGGGAATTTTGGGGAAGCTTAAGGAGGTTCTGAGAGTGAATAAGCCTGTGGTGTTTACTGGCCACTCAGCCGGAGGTCCGATAGCCATTCTCGCAACCATCTGGCTGTTGGAACAGCAAAGAAACTCAGACTCAAACACCAACTCCACTCCTCCAAGATGCATCACATTTGGATCTCCCCTTGTTGGCAACTTCATTTTCTCCCATGCCCTCAAAAGGGAGAAATGGTCCACCCATTTCGTGCACTTCGTCATGAGATACGACATTGTTCCACGAATCCATGTTGCTCCTCTACCTTCTTTGCAACCACAATTGCAAACCATCCTCAACTCCCTGAACTCGAGATCACCAGGGTCATCATCAAATGGAAATATAGCTACTGAATTCTTCATGACGGTGATGAGGAATGCATCGGCTGTGGTAAGCAACGCCGCCTGCCATCTTATGGGAAATACTAACCTTTTGCTAGACACTTTGAAAAGCTTTGTGAAATTGAGTCCTTACAGCCCTTTTGGCACTTACATTTTCTTTACTGAGAGCGAGAAAGTGGTGGTGGTGAGCAACCCGGATGCTATTTTACAAATACTATTCTACGCTTGTCAGTTGAGCTCTGAGAGCGAATCTGATCACATTGCTCAACAGAGTTTAAATGCCCATTGGGGTTATGAATCTAAAATGCAGAAATTGGAGCTCCTACATGCCATTCGTCTGGATGAATTGGATAAGCTTCCATTGTCCTTAACGAGCAGGAATACACCATTAACTGAAGCGTTGAATGAACTTGGCCTAAGTTCGAGAGCTTTATTGAATCTTCGGGCAGCGGGCACATTTGAAGAGCAGAAATTGAAAAATCAACAAAGGATGGAAGCAAAGAAACAATATATCAAGGAACGATTGGATTGGCTAGAAGAAAATTATAGAGCTGTATGTAAGGTTGATGGTTTGGGATACTATGATGCATTTAAACTCCAGAAGGATCCGAAAGACTTCCAAGCTAATATCAAGAGGCTTGAGCAAGCAGGCATATGGGATGAGATCGTAGAGATGCTCAAAAGATACGAGCTCCCAGAGGAATTCGAGGGCGATGACGAATGGATAAAACTTGGAACCAGGTTTCGCCGTCTCATTGAGCCTCTAGATATTGCTAACTACTATAGACACTCGAAGAATGATGATACTGGTCCTTATCTTGTAAAAGGAAGGCCAAAACGTTACAGATTTACACAAAGATGGCTCGAACATAATCAAAAGATGACAGAACCCAGTGAAGAATCAACTCTTTGGGCAAGGGTTGAGGAGCTTCGTATCCAAACCAAAACCAAAATGTACGCTGAATATTCAAGAGAAATTATAGAGCTGGAGAAGAAGATGAAGCGATGGGTCACTGAGATTGAAGATGACATGTTGTTAAAGAAATCTACCTTCATGGAGTGGTGGAAGACACTACCGGAACATCATAGATCACAGTCTTGTATTAGGGATGATATCGAGAGGATGGCAACTGACGACGATGCTATTAACACGATGTAG 2577 44.39 MATVPDRFRRNPIDRLVGISDDSKQSCSSTTQLHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGENNSVQFSSGLKVNLIITDYSMPEMTGYELLKKIKLLITHNQWLKEDCYEQESSAFREIPVVIMSSENILARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGENEGKKIGSKRKLHFDHDHDHHPSSPVSPASSAAVFDPCHGFLQRSAPSFRHEDEDKGEDEEPKQRASSELRKMTHSKLEDATGLKEDLIADAWAAAIKAHKHSKPFLVDKTRDFSIISFAGSWSSEAWFSASDSSFGETKIDTRLFPSVRSIGVDDYAVVNSAFFQKFEGILGKLKEVLRVNKPVVFTGHSAGGPIAILATIWLLEQQRNSDSNTNSTPPRCITFGSPLVGNFIFSHALKREKWSTHFVHFVMRYDIVPRIHVAPLPSLQPQLQTILNSLNSRSPGSSSNGNIATEFFMTVMRNASAVVSNAACHLMGNTNLLLDTLKSFVKLSPYSPFGTYIFFTESEKVVVVSNPDAILQILFYACQLSSESESDHIAQQSLNAHWGYESKMQKLELLHAIRLDELDKLPLSLTSRNTPLTEALNELGLSSRALLNLRAAGTFEEQKLKNQQRMEAKKQYIKERLDWLEENYRAVCKVDGLGYYDAFKLQKDPKDFQANIKRLEQAGIWDEIVEMLKRYELPEEFEGDDEWIKLGTRFRRLIEPLDIANYYRHSKNDDTGPYLVKGRPKRYRFTQRWLEHNQKMTEPSEESTLWARVEELRIQTKTKMYAEYSREIIELEKKMKRWVTEIEDDMLLKKSTFMEWWKTLPEHHRSQSCIRDDIERMATDDDAINTM 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29836743 29844611 - ClCG06G016640.2 Cla06g01631 275823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01631 858 SMART REC_2 33 174 IPR001789 GO:0000160
Cla06g01631 858 CDD REC_typeA_ARR 35 173 - -
Cla06g01631 858 Pfam Response regulator receiver domain 35 170 IPR001789 GO:0000160
Cla06g01631 858 PANTHER PROTEIN EDS1-RELATED 254 845 - -
Cla06g01631 858 Gene3D alpha/beta hydrolase 276 576 IPR029058 -
Cla06g01631 858 Pfam Lipase (class 3) 298 443 IPR002921 GO:0006629
Cla06g01631 858 Pfam Enhanced disease susceptibility 1 protein EP domain 653 842 IPR041266 -
Cla06g01631 858 Gene3D - 32 207 - -
Cla06g01631 858 MobiDBLite consensus disorder prediction 229 258 - -
Cla06g01631 858 ProSiteProfiles Response regulatory domain profile. 34 178 IPR001789 GO:0000160
Cla06g01631 858 CDD Lipase_3 288 453 - -
Cla06g01631 858 SUPERFAMILY alpha/beta-Hydrolases 288 450 IPR029058 -
Cla06g01631 858 SUPERFAMILY CheY-like 32 173 IPR011006 -
Cla06g01631 858 Coils Coil 785 812 - -
Cla06g01631 858 PANTHER PROTEIN EDS1-RELATED 254 845 IPR044214 GO:0006952
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01631 Cla-Chr6:29836743 Cla10g01386 Cla-Chr10:28962334 6.09E-10 dispersed
Cla10g01384 Cla-Chr10:28951968 Cla06g01631 Cla-Chr6:29836743 1.03E-09 dispersed
Cla01g00731 Cla-Chr1:8525172 Cla06g01631 Cla-Chr6:29836743 4.88E-44 transposed
Cla04g00211 Cla-Chr4:6815917 Cla06g01631 Cla-Chr6:29836743 2.39E-48 transposed
Cla04g00444 Cla-Chr4:16664904 Cla06g01631 Cla-Chr6:29836743 1.89E-46 transposed
Cla07g00490 Cla-Chr7:6980106 Cla06g01631 Cla-Chr6:29836743 2.65E-44 transposed
Cla08g00600 Cla-Chr8:17908808 Cla06g01631 Cla-Chr6:29836743 7.34E-38 transposed
Cla09g00782 Cla-Chr9:7904575 Cla06g01631 Cla-Chr6:29836743 1.69E-08 transposed
Cla10g01535 Cla-Chr10:30671838 Cla06g01631 Cla-Chr6:29836743 3.00E-45 transposed
Cla05g02508 Cla-Chr5:36447145 Cla06g01631 Cla-Chr6:29836743 1.22E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61336 PF18117 EDS1_EP 2.60E-52 No_clan Cla TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01631 K18875 - csv:101214385 1006.51