Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01636 | ATGGGCGCCAATGGCAAGTTCCGGTGGAAATTCCCCTTCCCTCACCGTCGTAATTCTAGGCTTGAATCGAACCAGCCTCCTAAAGAGTTCATTTGTCCAGTTTCTGGTTCGTTAATGGCGGACCCTGTCGTCGTCTCTTCTGGACAGACGTTTGAGCGTGTTTCTGCGCAGGTTTGCAGAAATTTAGGGTTCTCTCCTGTGTTAGAGGATGGTTCGAAGCCAGATTTCACTACTGTGATTCCGAATTTAGCTATGAAGAAGACGATTCTCCATTGGTGTGAGAAATCTGGTGCTCGGAATCTTCAGCCGCCTGATTACACCTCCGTTGAGAGCCTTGTTGCTGCATTGATGGAGAAGGAGAAGCCCCAAGCCGGAATTAGGGATTCCTCGGATAGGGATTTGTTAAAGAGAGTATCGGATTTGCCGCCGGTGAATTTTTCGCATGCTGCGACGGAGTATGGTCATCGTCCAGAACATTTCTACAGCAGCTCGTCGGAGGAATCGGTCATCGTCGGAGGAAGTCCGGGAACTCCTCTGCCGTTCACGACTCGACCTGCTTGTTATTATTCATTTTCGTCTTCTTCCTCTGAAACCGTGGAAAACGAAGTGCTCATCCAAACCCTAGGCCCTAATTCATCGATTTCCGAAGATGAGAAGAATTTTTTATCGAAGCTTGAGAGTCCCGATGTGTTTCAGCAAGAAGAAGGCGTTATTTCGCTAAGAAAAATCACGAAAACCAATGAGAATATTAGGGTTTCGCTCTGTACGCCTCGGATTCTTTTCTCTCTCCACCGATTGGTAACGTCGAGATATCCCAAAGTACAAATCAACGCCGTCGCCTCTCTGGTAAATCTCTCCCTCGAAAAGCCGAACAAACTGAAGATCGCGCGGTCGGGATTGGTTCCACACTTAATCGATGTGCTAAAAGGAGGACATACCGAAGCGCAAGAACACGCCGCCGGCGCGCTCTTCAGCCTAGCTTTAGAGGATGAAAATCGGATGGCGATCGGAGTTCTCGGCGCACTGCCGCCACTCCTTTACGCACTCCGATCGGAAAGCGAGCGAACTCGAGACGATTCCGCTCTGTGTCTCTACAACCTGACAATGATTCAGAGCAACCGAGTGAAGCTTGTGAAACTCGGCGCCGTAACCACTCTACTTTCCATGGTGAAATCAAGAAACTCGACGAATCGGCTGCTACTGATCCTCTGCAACATCGCCGTGTGTCAGGAGGGAAGGTCGGCAATGCTGGACGCCGACGCCGTCGCGCTTTTGGTCGAAATGCTGAGGGAGAAAGAGCTAAACTCCGAATCAACCCGCGAGAATTGCGTTGCGGCATTGTACGCTCTGAGCTATGGAAGCATGAGATTCAAAGGATTAGCGAAGGATGCCGGAGCGATAGAGGTTTTGATAGAGATTGTTGAAAGAGGAAGCGAGAGAGCGAGAGAGAAGGCGAAGAAGATATCGGAGAGGATGAGAACGAGAGGGAGATTCGATGAAGACGACGACGAAGAAGACGATCGTGGAGGCGAGTCGAGTTTTGAGAGAGGTGGACTCAGTTCGACTCGGTACCGAATCGGAGGTGGAAAATTTCCCAGCTCGGCTAATACGGTGCCGTTTTGA | 1623 | 50.15 | MGANGKFRWKFPFPHRRNSRLESNQPPKEFICPVSGSLMADPVVVSSGQTFERVSAQVCRNLGFSPVLEDGSKPDFTTVIPNLAMKKTILHWCEKSGARNLQPPDYTSVESLVAALMEKEKPQAGIRDSSDRDLLKRVSDLPPVNFSHAATEYGHRPEHFYSSSSEESVIVGGSPGTPLPFTTRPACYYSFSSSSSETVENEVLIQTLGPNSSISEDEKNFLSKLESPDVFQQEEGVISLRKITKTNENIRVSLCTPRILFSLHRLVTSRYPKVQINAVASLVNLSLEKPNKLKIARSGLVPHLIDVLKGGHTEAQEHAAGALFSLALEDENRMAIGVLGALPPLLYALRSESERTRDDSALCLYNLTMIQSNRVKLVKLGAVTTLLSMVKSRNSTNRLLLILCNIAVCQEGRSAMLDADAVALLVEMLREKELNSESTRENCVAALYALSYGSMRFKGLAKDAGAIEVLIEIVERGSERAREKAKKISERMRTRGRFDEDDDEEDDRGGESSFERGGLSSTRYRIGGGKFPSSANTVPF | 540 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 29881997 | 29883619 | - | ClCG06G016710.1 | Cla06g01636 | 275828 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01636 | 540 | Pfam | U-box domain | 27 | 95 | IPR003613 | GO:0004842|GO:0016567 | |
Cla06g01636 | 540 | Pfam | Armadillo/beta-catenin-like repeat | 330 | 368 | IPR000225 | GO:0005515 | |
Cla06g01636 | 540 | Pfam | Armadillo/beta-catenin-like repeat | 290 | 327 | IPR000225 | GO:0005515 | |
Cla06g01636 | 540 | MobiDBLite | consensus disorder prediction | 482 | 540 | - | - | |
Cla06g01636 | 540 | SMART | arm_5 | 329 | 369 | IPR000225 | GO:0005515 | |
Cla06g01636 | 540 | SMART | arm_5 | 288 | 328 | IPR000225 | GO:0005515 | |
Cla06g01636 | 540 | SMART | arm_5 | 409 | 452 | IPR000225 | GO:0005515 | |
Cla06g01636 | 540 | SMART | Ubox_2 | 29 | 92 | IPR003613 | GO:0004842|GO:0016567 | |
Cla06g01636 | 540 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 98 | IPR013083 | - | |
Cla06g01636 | 540 | SUPERFAMILY | ARM repeat | 220 | 485 | IPR016024 | - | |
Cla06g01636 | 540 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 299 | 336 | IPR000225 | GO:0005515 | |
Cla06g01636 | 540 | PANTHER | U BOX DOMAIN-CONTAINING | 1 | 529 | - | - | |
Cla06g01636 | 540 | ProSiteProfiles | U-box domain profile. | 25 | 99 | IPR003613 | GO:0004842|GO:0016567 | |
Cla06g01636 | 540 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 38 | 1 | 529 | - | - | |
Cla06g01636 | 540 | MobiDBLite | consensus disorder prediction | 482 | 499 | - | - | |
Cla06g01636 | 540 | CDD | RING-Ubox | 31 | 67 | - | - | |
Cla06g01636 | 540 | SUPERFAMILY | RING/U-box | 16 | 99 | - | - | |
Cla06g01636 | 540 | Gene3D | - | 217 | 398 | IPR011989 | - | |
Cla06g01636 | 540 | Gene3D | - | 399 | 503 | IPR011989 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g01636 | Cla-Chr6:29881997 | Cla07g00605 | Cla-Chr7:11031387 | 1.74E-38 | dispersed | |
Cla01g01396 | Cla-Chr1:28374684 | Cla06g01636 | Cla-Chr6:29881997 | 1.33E-179 | wgd | |
Cla06g01636 | Cla-Chr6:29881997 | Cla09g01823 | Cla-Chr9:35880803 | 2.28E-179 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01636 | - | - | csv:101213423 | 901.738 |