Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01637 ATGGCTTTCTTTCCTCCTCCCGCTTTCCTTTTTGCAATTTTGCTATCTGTTGTTCCATTCTCAGTTGAATCGAAACTTTCTCTTGATTATTACCAGAAAACTTGCCCCGATTTTGCCAGAATCGTCCGTGAAACCGTCGCTAACAAGGTGGCTTCTAGCCCAACCACCACCGCCGCAACTATGCGTCTCTTCCTCAACGATTGTTTAGTTGGAGGTTGCGATGGCTCTGTTCTCGTTGCTTCTAACGCCTTCAATCACGCCGAGCGCGATGCTGAAATCAATCTTTCTCTTCCAGGAGACGCGTTCGACGTCGTCGCTCGATCGAAGATCACCTTAGAGCTTTCTTGCCCCGGGATCGTCTCTTGTTCCGACGTATTAGCACAAGCGACTCGCGATCTCATCGCGATTGCAGGCGGACCGTCGTACAATGTTCAATTAGGGCGAAAAGACAGCCTGGTATCGAAATCTTCCGAAGTGGAAGGCAATATTCCGAAGGCGAATCAAACAATTGACGAGATGATTAAGCTATTCACATCGAAAGGATTCACGATTCAAGAAATGGTAGCGTTGTACGGCGGACGAACAATCGGATTCTCAAATTGCAAGGAATTCAGCGATCGTATCTTCAAGTTTAGCAAGGAAACACCAACAGATCCAGAGATTCATCCAAAGTTTGCAGAGGCTTTGAAAAAGACTTGCGAAGGATATGAGAAGAATCCGGGAATGTCGGCTTACAGCGACGCCGTAACGCCGGGGAAATTCGATAATGTGTATTACCAGAATCTGCTTAGGGGAATGGGGTTATCGGCGTCGGATCATGCGTTGGTGAAGGATCCGAGAACGAGGAAATTCGTGGAGATGTACGCCGGAAATCAAGCGTTGTTCTTCAAGGATTTTGCACACGCCATGGAGAAGATGAGCGTTCGTGAAGTGAAAACCGGTGGGAAAGGAGAAGTGAGGAGGAAATGCGATGTGTTCAATGAAATCCACACTTGA 996 47.49 MAFFPPPAFLFAILLSVVPFSVESKLSLDYYQKTCPDFARIVRETVANKVASSPTTTAATMRLFLNDCLVGGCDGSVLVASNAFNHAERDAEINLSLPGDAFDVVARSKITLELSCPGIVSCSDVLAQATRDLIAIAGGPSYNVQLGRKDSLVSKSSEVEGNIPKANQTIDEMIKLFTSKGFTIQEMVALYGGRTIGFSNCKEFSDRIFKFSKETPTDPEIHPKFAEALKKTCEGYEKNPGMSAYSDAVTPGKFDNVYYQNLLRGMGLSASDHALVKDPRTRKFVEMYAGNQALFFKDFAHAMEKMSVREVKTGGKGEVRRKCDVFNEIHT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29893824 29894819 - ClCG06G016720.1 Cla06g01637 275829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01637 331 PANTHER PEROXIDASE 41 10 330 - -
Cla06g01637 331 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 Pfam Peroxidase 42 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 Gene3D - 29 327 - -
Cla06g01637 331 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Cla06g01637 331 Gene3D Peroxidase, domain 2 164 306 - -
Cla06g01637 331 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla06g01637 331 PANTHER - 10 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01637 Cla-Chr6:29893824 Cla11g00913 Cla-Chr11:15495659 3.50E-82 dispersed
Cla01g01394 Cla-Chr1:28330345 Cla06g01637 Cla-Chr6:29893824 2.47E-160 wgd
Cla10g01386 Cla-Chr10:28962334 Cla06g01637 Cla-Chr6:29893824 6.14E-128 wgd
Cla06g01637 Cla-Chr6:29893824 Cla09g01824 Cla-Chr9:35882966 1.48E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01637 K00430 - csv:101213178 586.26