Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01695 ATGGAACCACGACGGCGGCGGCGACCTCTGTTCCTTCTACTTCAGCTCTTTATCTTCTACCTCTTCTTCTTTCCCTCTTATTCAGTTGATTTTCTCTTCAATTCATTCTCAAACCAATCGAATGGCACTGACATCATTCTCATTAGCGACGCGAGATTCGATTCCCCTGTAATTCGCCTCAACAACGACTCAAACCCAAATTCAATCGGGCGAGCTTTCTATCACACGAAGCTGATTATGAAACCCACTTCGAATTCCACTACGATTTCTTCTTTTTCAACTTCTTTTGTGTTCTCAATCTTGTTGGAAGTCGCTACAAGTCCAGGCTTCGGTATGGCCTTCGTTCTTTCCAATTCCACTTCCCTTCCCGGCGTTATAGCCGGCCAATACTTCGGTCTCTTCACAAATTCCACAACCCATGTCGTTGCTCCACTTCTCGCCGTCGAATTCGACACCGGCCGAAACACAGAGTTCAACGACCCAGATGATAGCCACATCGGAATCGATTTGAACAGTATGTTGTCGAGTAAAACACACGGCGCTGGGTATTTTGACTCTAATGGGCAATTTATTCCAATTCAGATGAGAAATGGGCAAAACCTTCGCGCTTGGATCGAATTCGATGGGTCAAATTTCGAAATCAACGTCACAATCGCCCCAATTGGAATTCCTCGTCCTTCAATACCCACTTTGAGTTTTAGGGATCCTGTGATTGCGAATTATGTATCGACTGAAATGTTTGTGGGATTTTCAGCATCGAAGACAAAATGGGTTGAGGCGCAGAGGATTTTGGCGTGGAGTTTTAGTGACACTGGGGTTGCTAGAGAGATTAACACCACAAATTTCCCTGTGTTTATGAGAGCATCATCACCGTCTTCCTTGTCGCCGGGGTCTGTTGCCGGAATTGTAATTGGCTGTGTTGTGTTTGTGATCATAATTTCTGGATTTGGGGTTTTTTGGTATTGGCGAAAGAACAGAGCAAAAGACGAAGATGATGAAATTGAGGATTGGGAGCTCGAATACTGGCCTCACAGATTCTCCAACGAGGAGCTTTCAAAGGCTACTGATGGATTTTCCGATGAAAATCTGTTGGGTTCCGGCGGATTTGGAAAGGTATTCAAAGGAACTTTACCAAACAACACGGAAATCGCCGTTAAGTGTGTAAACCACGATTCAAAACAGGGGTTAAAGGAATTCATGGCTGAAATCTCGAGTATGGGTAGGCTTCAACATAAAAATCTAGTTCAAATGCGAGGATGGTGTCGAAAAGGCAATGAATTAATGTTGGTTTATGATTACATGCCGAATGGAAGCCTTAATCGGTGGATTTTTGACAAACCCACAACGCTACTCAGCTGGAAACAGCGCCGCCGTGTGCTCGCCGACGTTGCAGAGGGTTTGAACTATCTCCACCATGGTTGGGATCAGGTGGTAATTCACAGAGACATAAAATCGAGCAATGTATTGTTGGATTCGGAAATGAGAGGCAGAGTCGGCGATTTTGGGCTGGCGAAATTGTACCAACACGGCGAAACTCCGAACACCACTCGAGTCGTTGGGACTTTGGGGTATTTAGCGCCGGAGATTGCGACAGTGGCTACTCCGACGGCGGCTAGCGATGTGTATAGTTTTGGGGTTGTGGTTCTTGAAGTGGTGTGTGGACGGCGGCCGATTGAGTTGGCCGCGGAGGAAGAAGAAATGGTACTTATTGATTGGGTGAGGGATCTTTACTCTGCCGGCCGGTTGGTTGCGGCGGCAGACTCGAGAATCAGAGATGAGTATGAAATTGAAGAGATTGAGCTGATGTTGAAGCTTGGTTTAGCTTGTTGTCATCCGGACCCGGAACGCCGGCCGACAATGAGAGAGGTGGTGGCAGTTTTGATAGGAGAACAACCGGCAGCCGAGTCGGTAGAGCTTTTATCGGGATTGGCCAGTGGCATGGTTGATGGCATCTCAGACGAGGATGTGTGA 1971 46.88 MEPRRRRRPLFLLLQLFIFYLFFFPSYSVDFLFNSFSNQSNGTDIILISDARFDSPVIRLNNDSNPNSIGRAFYHTKLIMKPTSNSTTISSFSTSFVFSILLEVATSPGFGMAFVLSNSTSLPGVIAGQYFGLFTNSTTHVVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSMLSSKTHGAGYFDSNGQFIPIQMRNGQNLRAWIEFDGSNFEINVTIAPIGIPRPSIPTLSFRDPVIANYVSTEMFVGFSASKTKWVEAQRILAWSFSDTGVAREINTTNFPVFMRASSPSSLSPGSVAGIVIGCVVFVIIISGFGVFWYWRKNRAKDEDDEIEDWELEYWPHRFSNEELSKATDGFSDENLLGSGGFGKVFKGTLPNNTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWIFDKPTTLLSWKQRRRVLADVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSEMRGRVGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSFGVVVLEVVCGRRPIELAAEEEEMVLIDWVRDLYSAGRLVAAADSRIRDEYEIEEIELMLKLGLACCHPDPERRPTMREVVAVLIGEQPAAESVELLSGLASGMVDGISDEDV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30553401 30555371 - ClCG06G017340.2 Cla06g01695 275887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01695 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Cla06g01695 656 SUPERFAMILY Protein kinase-like (PK-like) 334 627 IPR011009 -
Cla06g01695 656 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Cla06g01695 656 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g01695 656 Pfam Legume lectin domain 29 281 IPR001220 GO:0030246
Cla06g01695 656 PANTHER - 13 646 - -
Cla06g01695 656 CDD lectin_legume_LecRK_Arcelin_ConA 29 272 IPR001220 GO:0030246
Cla06g01695 656 CDD STKc_IRAK 364 627 - -
Cla06g01695 656 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Cla06g01695 656 Gene3D Transferase(Phosphotransferase) domain 1 434 639 - -
Cla06g01695 656 Gene3D Phosphorylase Kinase; domain 1 321 433 - -
Cla06g01695 656 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 13 646 - -
Cla06g01695 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 286 IPR013320 -
Cla06g01695 656 Pfam Protein kinase domain 359 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla06g01695 656 Gene3D - 27 286 - -
Cla06g01695 656 SMART serkin_6 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00751 Cla-Chr6:10001268 Cla06g01695 Cla-Chr6:30553401 1.96E-53 dispersed
Cla06g01695 Cla-Chr6:30553401 Cla07g00266 Cla-Chr7:2951948 1.21E-95 dispersed
Cla06g01695 Cla-Chr6:30553401 Cla10g02025 Cla-Chr10:36020308 6.64E-169 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80663 PF00069 Pkinase 9.90E-53 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01695 - - cmo:103502376 1155.2