Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla06g01701 | ATGGAAGCTGGGAGTAGATTCTACTCTGCTACGGATGAGTTCAGATTGGAAGGCAAATGGTTGGTTGACCCCAGGCATCTTTTCGTTGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAATATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGAGAAACAGCTGATGAGGTTGCAAAGAAAGAGGCTCGGTTTGCTCGAGAAGTTGCAATGCTGTCTAAAGTACAACATAAGAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACCGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAACATGCGCCCACGGTGCTTGGACACACGCGTAGCAGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGTCTTCACTCACATGGCATCATACACCGTGATCTGAAACCTGGTAGTCTTTTTGATCCACCTCATAATCCTATAAATCTTCATTCCATTCCAAATGCTCTGTTACCCAACCCTTTTAATGAATTAGTGCATTGTAATAATTTGGTTATTATTTCAATTTCAAAGAACCTTCTGTTGACTGCAGATCACAAAACAGTTAAATTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCAGAGACGGGGACATACCGTTGGATGGCTCCAGAGTTGTACAGCACTGTGACACTAAGGCAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCTATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCAGCATATGCAGCTGCTTTTAAGATTCTTCATATGCACTCTTCTTACCATGTCATCTCTCTGATTGATGGAATTTTGAATGTTAGGCCTAGCGCAGAGAATATTCCAGAGGAACTGGCTATCATTCTAACATCATGCTGGCAGGAGGATGCAAATGCTCGTCCAAATTTCACCCAAATAATCCAAATGTTACTTAATTACCTTTATACCATTTCACCCCCCGAGCCGATGATACCTTCCCGAATTTTCTCTTCTGAGAACACTGTTTTTCCTCCTGAGTCTCCCGGAACAAGCTCACTAATGGCAGTCCGTGACGATTCAGGGGACACTCCAAAAGCTAAAATGGAAAATAATCCCAGAGGTTGTTTCTTCTGCTCCAATGACTGTTACTAA | 1236 | 42.64 | MEAGSRFYSATDEFRLEGKWLVDPRHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETADEVAKKEARFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRVAVGFALDIARAMECLHSHGIIHRDLKPGSLFDPPHNPINLHSIPNALLPNPFNELVHCNNLVIISISKNLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKILHMHSSYHVISLIDGILNVRPSAENIPEELAIILTSCWQEDANARPNFTQIIQMLLNYLYTISPPEPMIPSRIFSSENTVFPPESPGTSSLMAVRDDSGDTPKAKMENNPRGCFFCSNDCY | 411 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 30598998 | 30602464 | + | ClCG06G017420.2 | Cla06g01701 | 275893 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla06g01701 | 411 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 376 | IPR011009 | - | |
Cla06g01701 | 411 | Pfam | Protein tyrosine and serine/threonine kinase | 31 | 152 | IPR001245 | GO:0004672|GO:0006468 | |
Cla06g01701 | 411 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 157 | - | - | |
Cla06g01701 | 411 | ProSitePatterns | Protein kinases ATP-binding region signature. | 33 | 54 | IPR017441 | GO:0005524 | |
Cla06g01701 | 411 | ProSiteProfiles | Protein kinase domain profile. | 27 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla06g01701 | 411 | Gene3D | Transferase(Phosphotransferase) domain 1 | 107 | 352 | - | - | |
Cla06g01701 | 411 | Pfam | Protein kinase domain | 195 | 343 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla06g01701 | 411 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 106 | - | - | |
Cla06g01701 | 411 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 195 | 386 | - | - | |
Cla06g01701 | 411 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 1 | 157 | - | - | |
Cla06g01701 | 411 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 195 | 386 | - | - | |
Cla06g01701 | 411 | MobiDBLite | consensus disorder prediction | 373 | 393 | - | - | |
Cla06g01701 | 411 | PIRSF | TyrPK_CSF1-R | 192 | 357 | - | - | |
Cla06g01701 | 411 | PIRSF | TyrPK_CSF1-R | 117 | 154 | - | - | |
Cla06g01701 | 411 | PIRSF | TyrPK_CSF1-R | 15 | 128 | - | - | |
Cla06g01701 | 411 | CDD | STKc_MAP3K-like | 33 | 345 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g01701 | Cla-Chr6:30598998 | Cla11g01089 | Cla-Chr11:22239628 | 1.62E-62 | dispersed | |
Cla01g01888 | Cla-Chr1:33686062 | Cla06g01701 | Cla-Chr6:30598998 | 1.95E-85 | transposed | |
Cla10g02141 | Cla-Chr10:37063622 | Cla06g01701 | Cla-Chr6:30598998 | 3.68E-127 | transposed | |
Cla10g01313 | Cla-Chr10:28072770 | Cla06g01701 | Cla-Chr6:30598998 | 0 | wgd | |
Cla06g01701 | Cla-Chr6:30598998 | Cla09g01885 | Cla-Chr9:36549776 | 2.93E-171 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80664 | PF00069 | Pkinase | 8.80E-22 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla06g01701 | - | - | csv:101223021 | 670.618 |