Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01705 ATGGAGACTCTTCTTCATTATCTTCTTCCTCTTCAACTGTCACTTCATTCAATTTCCTTCACTATTTTCATCCTCATCCTCATCTTCCTTCTCCAAAAATGGCTTCTCTCCCCTTCACAAACTTCCCCTCCATCACCCCCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCTCATCTCACTCTCCTAAACTACGCCCGCCTCCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACCATCATCGTTTCTTCCTCCGATCTCGCTCGTGATATCATGAAAACCCACGATCTCGTCTTCGCCAACCGACCCAAATCAACCATTGGCCACAAGCTTCTTTACAGCTCCAGAGACATAGCTGCTTCTCCCTACGGCGAGTACTGGCGGCAGATGAAAAGCGTTTGCGTTCTTCATCTCTTGAGCAGCAAAAGAGTTCAATCCTTCCGTTCTATAAGGGAAGAAGAAGTCAAATTCATGATCGAGAAGATCCAACACAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTCTGGATTGACTAACAATGTAATTTGCAGAGTGGGTTTAGGGAGAAAATATGGAGAGGGAGAAGATGGGAAGAAGTTCATGGATCTTTTATCGGAATTTGGGCAATTATTGGGGAGTTTTAGCATTAGAGATTTCATTCCTTGGTTGGGTTGGATTGATGGGATTAGTGGGCTGGATTCTAAAGCAAACAGAGTAGCTAAAGAGCTGGATGATTTCTTTAACAGAGTGATTGAAGATCATATCAATCTAGAAAACAGAGACCAGCATTTTGATGAGCATAAGGATTTGGTAGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTTCCCCTTCAGATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACAACTTACACAGTATTAGAATGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGGAGAAACTGAAGAATGAAATTAAAGAAATAAAAGGTGATCACAAATGGTGCTATGTAAACGAGGATGATTTAGACAAAATGGTATATTTAAAGGCAATAATCAAAGAGACATTGCGACTACACCCACCCATCCCACTTCTCGTTCCGAGAGAATCAACCCAACACATAAAGTTAAGAGGGTATGACATTAAACGTGGGACTCGAGTTATGATCAATGCATGGGCAATCGGAAGAGACCCAAAATTATGGGAAGAAGCAGAGGAGTTTCGACCAGAAAGGTTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTTGAGTTGATCCCATTTGGTGCAGGGAGAAGAGGATGTCCTGGAATTGTATTTGCAACTATGATTAATGAGATAGCTTTAGCAAATTTGGTGCATATGCTTGAGTGGATATTGCCAAATGGTGAGGATTTGGACATGACAGGAACCTTTGGTTTAACCATTCATAGAAAGTTTCCACTTGTGGCTACCGCAATTCCTAACAAGGAATGA 1524 42.32 METLLHYLLPLQLSLHSISFTIFILILIFLLQKWLLSPSQTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARLHGPLFLLRLGSVPTIIVSSSDLARDIMKTHDLVFANRPKSTIGHKLLYSSRDIAASPYGEYWRQMKSVCVLHLLSSKRVQSFRSIREEEVKFMIEKIQHNPVSVNLTEIFSGLTNNVICRVGLGRKYGEGEDGKKFMDLLSEFGQLLGSFSIRDFIPWLGWIDGISGLDSKANRVAKELDDFFNRVIEDHINLENRDQHFDEHKDLVDVLLWIQRENSIGFPLQMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMEKLKNEIKEIKGDHKWCYVNEDDLDKMVYLKAIIKETLRLHPPIPLLVPRESTQHIKLRGYDIKRGTRVMINAWAIGRDPKLWEEAEEFRPERFMNNSIDFKGQDFELIPFGAGRRGCPGIVFATMINEIALANLVHMLEWILPNGEDLDMTGTFGLTIHRKFPLVATAIPNKE 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30628085 30630367 + ClCG06G017460.1 Cla06g01705 275897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01705 507 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 SUPERFAMILY Cytochrome P450 43 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 Pfam Cytochrome P450 43 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PANTHER CYTOCHROME P450 71B11-RELATED 20 502 - -
Cla06g01705 507 Gene3D Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01705 507 PANTHER CYTOCHROME P450 71A21-RELATED 20 502 - -
Cla06g01705 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla03g00297 Cla06g01705 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01705 Cla-Chr6:30628085 Cla05g02608 Cla-Chr5:37303566 7.82E-135 dispersed
Cla05g02601 Cla-Chr5:37242515 Cla06g01705 Cla-Chr6:30628085 1.35E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01705 - - csv:101203222 813.142