Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01725 ATGGCGAGAGTTAACGACAATTGGGAGAGGCTAGTGCGTGCGACTTTGAAGAGAGAGCAGCTCAGAAATGCAGGGCAAGGCCATGGGAGGACTCCCAGTGGGATTGTTGGAGCTGTACCACCCTCTCTTGGAAAAACCACAAACATTGACGCTATTTTGCAGGCTGCCGATGAAATCCAAGCGGAGGACTCCACTGTTGCTAGGATTTTGTGTGAGCAGGCGTACAGAATGGCACAAAACTTGGATCCCAACAGCGATGGTAGAGGTGTTCTTCAGTTCAAGACTGGATTGATGTCTGTTATTAAGCAAAAACTTGTAAAGAAGGATGGGGCATCTATAGATCGTCATCGTGATATTGAACATCTGTGGGAGTTCTACAAGCAATATAAGAGACGACATAGAATAGATGATATACAGAAAGAAGAACAGAAATGGCGGGAGTCAGGAGTAATGAGTGCTAACTTGGGAGAGTTGGAGCTTAGATATTCTGAAGCGAAGAAAGTAATTGCTAACCTAAGGGCTTTAGTTGAGGTGATGGAGGCCCTCAGCGGAGATGCAGATCCTCAAGGAGTTGGAAGATTGATTATGGAGGAGCTACGAAGAATTAGAAGTTCTGATACTACATTATCGGGAGAATTTGTACCCTACAATATTGTCCCCTTGGATGCACAATCACTAACAAACGCCATTGGCATTTTCCCTGAAGTTAAGGCTACAATATCTGCAATCAGATATACAGAGCATTTCCCTAGACTGCCTTTGGAATTTCAGATATCTGGACAAAGGAGTGCAGATATGTTTGACCTTCTTGAATATGTATTTGGATTCCAGGGGGACAACATAAGAAATCAACGAGAGCATGTGGTTCTCATGGTAGCAAATGCTCAATCTCGTCTTGGCATACCTAATAATGCTGATCCGAAAATAGATGAGAAAGCAGTCAATGAGGTTTTTTTGAAGGTGCTTGATAACTACATCAAGTGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTAGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTTCGCTTCCTTCCTGAATGCATTTGCTATTTGTTCCACCATATGGCAAAAGAATTGGATGCTATACTTGATCATGGAGAAGCAATTCCTTCTAAAAACTGTATGCTGGAAGATGGTTCTATGTCTTTCCTCCAACGAATCATTTGTCCTATCTACGAGACACTTGTAGCCGAAACTGAAAGAAACAAAAATGGGAAAGCTGCACATTCAGCATGGAGGAACTACGATGATTTCAATGAATACTTTTGGTCACCTACTTGCTTTGAATTGGGCTGGCCAATGAGGAAGGAATCAAATTTTTTACAGAAGCCTAGAGGCTCGAAACGGGTTAGAAACAAGCATTTTGATGTAGTAAGATGGGCGAAATGTTCTAGAGTTGCTTTTATCGTTGCAACTTGCTTGGTAAATTCCTTTAATGAACATAATGGCCATGTCATGGTGGAACCATCTTTTGTCTGTAGGAGGGCTTTGAGTTCTTTAACTGAAGTAGCTCACAAGACTCGTATGGAAATGATGGAGGCTTATATGAAAGTGAAAAAGAACCATTTTGGATTCTTACCGGCCAATGTGCTCCTACCTTCTTCATCCTTAGAAGCAATCTCTGTGAGTATAGACCCTTTTTTTGAAGCTCTTCTCCACTTTGGTTACTTGGCTGTAAGACATGGAGCTTTACCCTCGCTGGCAGATGCTGACTCAGAAGCTCTCCTTTCTAGCCCCATGCCTCTGCCGCCTCGAGACTGCATTGAAGAAGATTGGTATGACTATTTTCCTCACCATAGTTATGAATCTTTCAACCCTGCTCCATACTTGATGGCCTTGGCTCCATGGTTTAGAGATCTTGGCCTTTGCATCAAGGCCATCCCTGCTCGAAAACATCCCAACCGTTTCCACCGTCTCTGGATCTTTTTGGCAATTGTATTCCAGGCTCTGACAATTTTTGCCTTCCACAATGAGCGTATTAATTTGGACACTATCAAAGCTATTCTTAGCATTGGGCCAACATTTGCAATCATGAACTTTATTGAGAGCTCCTTAGATGTATTGCTTACTTTTGGGGCATACACGACTGCAAGAGGAATGGCTATATCAAGGATTGTTATTAGGTTCTTCTGGAAGGTTCTTGAAGAAAGAAATACTCGAAGCTCAGATAATTCATTCTATTTTCGAATATATATTATAGTATTGGGTGTTTATGCTGCTTTACGCCTTGTGGTTGCAATGTTGCTGAAGTTACCTGCATGCCATACTCTTTCTGAGATGTCAGATCAGTCTTTTTTTCAATTTTTCAAATGGATCTATCAGGAACGTTATTTCGTCGGTCGTGGCCTATATGAAAAACCAAGTGACTATTGCAGATATGTAGCCTTTTGGTTAGTGCTCTTGATTTGTAAATTTGTTTTTGCTTACTTTCTCCAGATTCAACCACTTGTCCAACCAACCACTATTATTGTCAACCTTCCATCTCTTGAATATTCATGGCATTCTTTCATTTCGAAAAATAACAATAATGTGTCGACTGTAGTTAGTTTATGGGCTCCTGTTGTGGCTCTCTATCTGTTGGACATTTACATATGGTACACACTCTTGTCTGCCATCATTGGTGGTGTAAAGGGTGCTCGGGGTCGTTTGGGAGAGATACGATCACTTGAAATGATGCACAAACGTTTTGAGAGCTTTCCAGAAGCATTTGTGAAGAACCTTGTCTCTACACAGACAAAAAGTTTGCCACCCACCGGACAAGCACCTCAGGACTCTCCGGATATGAGCAAGACATATGCAGCAATCTTTTCCCCATTTTGGAATGAGATCATTAAAAGTTTACGTGAGGAAGACTTTATTAGCAATAGGGAGATGGACTTGCTTTCTATTCCCAGCAACACAGGGAGCCTCAGATTGGTCCAATGGCCTTTGTTTCTTTTAAGTAGTAAGATATTCTTGGCTGTTGATCTGGCTTTGGATTGCCAAGATACGCAGACAGATCTATGGTACAGAATATGTCGGGATGAATATATGGCATATGCAGTTCAAGAATGCTACTATAGTGTTGAAAAAATCTTATATGCCCTTGTCGATGGTGAAGGGAGACTTTGGGTTGAAAGGATATTTCGGGAGATTACCAATAGTATTTCAGAGGGCTCGCTGGTTATAACATTGAACCTTAAGAAGATTCCAATTGTGTTACAAAAGTTTACGGCGCTTACAGGGCTTTTGGTACGCTTTCTGTTACCTGTTTTTCCTCGGTATCTTATTGTTAATTTAGATGTCAATTTGACTCGAAATGAAACTCCTGAACTTGCTAGAGGTGCTGCAAAAGCTGTATTTGAGCTTTATGAGGTTGTTACCCATGACCTGCTTTCATCAGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAACGAAGGTCGCCTTTTTTCTCGGATTCAATGGCCCAAAGATTTGGAAATTAAAGAGCTTGTGAAGCGTCTGCATTTACTTCTTACCGTGAAGGACTCTGCAGCTAACATCCCAAAAAATCTTGAAGCAAGAAGAAGACTACAGTTTTTTACAAATTCATTATTTATGGACATGCCTTCGGCAAAACCTGTCAGTGAAATGGTGCCGTTCAGCGTCTTTACTCCATACTACAGTGAAACTGTGCTTTATAGTTCCTCTGAAATACGAATGGAAAACGAGGATGGCATATCCATTCTTTTCTATCTTCAGAAGATTTTTCCAGCTACTACTACCGCTGCCAAAATTCCAAATACCTGCTATACTGTTGTAGCTTTGGTGATTGAGCTCCAAAAAAGTCCAAGTGATGCATTGGAGCTTCGATTTTGGGTTTCTTATAGAGGGCAGACCCTAGCTCGGACAGTTCGTGGTATGATGTACTACAGAAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGATGATTATTCTCAAACGAACTTTCCCACGAGTCAGGGCTTTGAGTTATCTCGAGAATCAAGGGCACAAGCAGACTTGAAGTTTACTTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCAGAGGCTGCTGATATTGCTCTTTTGCTGCAGAGGAATGAGGGACTTCGTGTTGCTTTCATTCACGTGGAAGATAGTGTTGCATCTGACGGTAAGGTTGTAAAGGAATTTTATTCGAAGCTTGTGAAAGCTGATATACATGGAAAAGATCAGGAGGTATATTCGATCAAACTTCCTGGAGAACCAAAGCTAGGAGAAGGAAAACCTGAAAACCAAAACCATGCTATAGTTTTCACTCGTGGAGATGCTGTTCAAACTATTGACATGAACCAGGACAACTATCTTGAAGAGGCATTGAAAGTGAGAAATCTTCTGGAGGAATTTCATGGAAAGCATGGGCTTCGCCCTCCTACCATCTTAGGCGTGAGAGAGCATGTATTCACTGGAAGTGTCTCTTCGTTAGCGTGGTTCATGTCCAATCAGGAAACTAGCTTTGTAACCTTAGGACAACGTGTCTTGGCAAGTCCTCTCAAGGTCCGAATGCATTATGGGCATCCTGATGTGTTTGACCGTATATTTCATATAACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGGCAGGGTAACATTACACACCACGAGTACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAAATAGCCCTGTTTGAAGGGAAAGTAGCTGGTGGGAATGGAGAGCAAGTTCTCAGCAGGGATGTTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTTTCGTTTTATTTCACAACTGTTGGTTACTATGCATGTACAATGATGACAGTTCTTGTGGTTTACATTTTCTTGTATGGACGGGTTTACTTGGCCTTTGCTGGACTTGACGAAGCAATCTCAAGAAGAGCAAAAATGTTGGGAAACACAGCATTGGATACTGCACTGAATGCTCAGTTTTTGTTTCAGATTGGAGTTTTTACAGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTGCTGAAGTATCGAGCAACTGGCAGAGGCTTTGTGGTCCAGCACATCAAATTTGCTGAAAATTATCGCCTCTACTCAAGAAGTCATTTCATCAAGGCGCTTGAGGTGGCATTGCTTCTTATTGTCTACATTGCGTATGGGTATTCAGAAGGAGGTGCAAGTTCTTTTGTTTTACTTACTCTCAGCAGTTGGTTCCTCGTCATTTCGTGGCTCTTTGCTCCTTATATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGACGATTGGACGAGCTGGCTATTCTACAAAGGTGGAGTAGGGGTTAAGGGAGAGAACAGCTGGGAATCATGGTGGGATGAGGAACAGTTATATGGTTTCTCGTGGGTGGTGCTCGTTGGGATTGTTTTGATATTCAAGATCTTCACCTTCAGTCCTAAAAAATCAACGAACTTCCAGCTATTGATGAGATTTATTCAGGGTGTCACAGCCATTGTACTGGTTACAGCTCTTGGTCTAATTGTTGGCTTTACTAACCTATCGATAACCGATTTATTTGCAAGTCTTCTGGCATTTATTCCTACTGGATGGGCTATATTATGTTTAGCAGTTACTTGGAAGAAAGTGGTGAGAAGTCTAGGCTTGTGGGACTCGGTACGTGAATTTGCCAGGATGTATGATGCTGGGATGGGATTAATAATATTCGTGCCCATCGCATTCTTATCCTGGTTTCCATTCATTTCCACGTTCCAGTCTCGTCTGCTCTTCAACCAAGCTTTCAGCCGTGGGCTTGAGATCTCCCTCATCCTTGCTGGAAACAAAGCAAACGTCGAGACATACTGA 6015 41.88 MARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPPSLGKTTNIDAILQAADEIQAEDSTVARILCEQAYRMAQNLDPNSDGRGVLQFKTGLMSVIKQKLVKKDGASIDRHRDIEHLWEFYKQYKRRHRIDDIQKEEQKWRESGVMSANLGELELRYSEAKKVIANLRALVEVMEALSGDADPQGVGRLIMEELRRIRSSDTTLSGEFVPYNIVPLDAQSLTNAIGIFPEVKATISAIRYTEHFPRLPLEFQISGQRSADMFDLLEYVFGFQGDNIRNQREHVVLMVANAQSRLGIPNNADPKIDEKAVNEVFLKVLDNYIKWCKYLRIRLAWNSLEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDAILDHGEAIPSKNCMLEDGSMSFLQRIICPIYETLVAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELGWPMRKESNFLQKPRGSKRVRNKHFDVVRWAKCSRVAFIVATCLVNSFNEHNGHVMVEPSFVCRRALSSLTEVAHKTRMEMMEAYMKVKKNHFGFLPANVLLPSSSLEAISVSIDPFFEALLHFGYLAVRHGALPSLADADSEALLSSPMPLPPRDCIEEDWYDYFPHHSYESFNPAPYLMALAPWFRDLGLCIKAIPARKHPNRFHRLWIFLAIVFQALTIFAFHNERINLDTIKAILSIGPTFAIMNFIESSLDVLLTFGAYTTARGMAISRIVIRFFWKVLEERNTRSSDNSFYFRIYIIVLGVYAALRLVVAMLLKLPACHTLSEMSDQSFFQFFKWIYQERYFVGRGLYEKPSDYCRYVAFWLVLLICKFVFAYFLQIQPLVQPTTIIVNLPSLEYSWHSFISKNNNNVSTVVSLWAPVVALYLLDIYIWYTLLSAIIGGVKGARGRLGEIRSLEMMHKRFESFPEAFVKNLVSTQTKSLPPTGQAPQDSPDMSKTYAAIFSPFWNEIIKSLREEDFISNREMDLLSIPSNTGSLRLVQWPLFLLSSKIFLAVDLALDCQDTQTDLWYRICRDEYMAYAVQECYYSVEKILYALVDGEGRLWVERIFREITNSISEGSLVITLNLKKIPIVLQKFTALTGLLVRFLLPVFPRYLIVNLDVNLTRNETPELARGAAKAVFELYEVVTHDLLSSDLREQLDTWNILLRARNEGRLFSRIQWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEARRRLQFFTNSLFMDMPSAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPATTTAAKIPNTCYTVVALVIELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDDYSQTNFPTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEGLRVAFIHVEDSVASDGKVVKEFYSKLVKADIHGKDQEVYSIKLPGEPKLGEGKPENQNHAIVFTRGDAVQTIDMNQDNYLEEALKVRNLLEEFHGKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEAISRRAKMLGNTALDTALNAQFLFQIGVFTAVPMIMGFILELGLLKYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGYSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQLYGFSWVVLVGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIVLVTALGLIVGFTNLSITDLFASLLAFIPTGWAILCLAVTWKKVVRSLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVETY 2004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30768245 30804399 + ClCG06G017700.2 Cla06g01725 275917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01725 2004 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
Cla06g01725 2004 Pfam 1,3-beta-glucan synthase component 1205 1276 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cla06g01725 2004 Pfam 1,3-beta-glucan synthase component 1298 1729 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cla06g01725 2004 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1730 1846 - -
Cla06g01725 2004 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 660 1730 - -
Cla06g01725 2004 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1848 2001 - -
Cla06g01725 2004 PANTHER BNAC03G35120D PROTEIN 1730 1846 - -
Cla06g01725 2004 PANTHER BNAC03G35120D PROTEIN 1848 2001 - -
Cla06g01725 2004 PANTHER BNAC03G35120D PROTEIN 660 1730 - -
Cla06g01725 2004 SMART FKS1_dom1_2 347 460 IPR026899 -
Cla06g01725 2004 PANTHER BNAC03G35120D PROTEIN 1 497 - -
Cla06g01725 2004 Coils Coil 155 175 - -
Cla06g01725 2004 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01330 Cla-Chr3:28360532 Cla06g01725 Cla-Chr6:30768245 1.23E-166 dispersed
Cla03g01332 Cla-Chr3:28452952 Cla06g01725 Cla-Chr6:30768245 4.59E-136 dispersed
Cla03g01337 Cla-Chr3:28642943 Cla06g01725 Cla-Chr6:30768245 0 dispersed
Cla04g01258 Cla-Chr4:27707420 Cla06g01725 Cla-Chr6:30768245 1.22E-14 dispersed
Cla06g01725 Cla-Chr6:30768245 Cla02g00054 Cla-Chr2:550464 3.24E-17 dispersed
Cla10g00699 Cla-Chr10:10853464 Cla06g01725 Cla-Chr6:30768245 1.15E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01725 K11000 - csv:101217890 2469.11