Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01736 ATGATCTACTTCTCCGTGTCCTTCTTACTTCTCTCAAGTTCTTTATGGGCTTTCTTTCTTCTCTATCTTTGCATCTCTAAATTCTACTGCTTCTCTAGAAAGCGCTTTTACTATTCTCCACCTTCTTACCCCTTCTTCGGTTGCTTGATTTCCTTTTACAAAAACCGGCGCCGCCTTCTGGCATGGTACACCGACCTGCTGTCCGATTCGCCGACTCAGACCATTGTGGTGCACCGGCTCGGTTCGAGGCGGACCGTTGTGACGGCTAACCCAGCCAATGTGGAGCACATGCTCAAGACCAATTTCATTAATTACCCTAAAGGAAAGCCGTTTACTGACATACTCGGCGATCTACTCGGCTGTGGCATTTTTAACGTCGACGGCGATTTGTGGTCCAGCCAACGCAAGCTCGCCAGTCATGCATTTTCCGCTAAGTCTCTAAGAGAATTCGTCGTTAAGACGCTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCAGTAACGCTGCTCGAACTAACGCCGTCATTGATTTGCAAGATGTTTTGGGAAGACTCGCTTTTGACACAGTTTGTAAGGTGACGCTGGGAACGGATGAGCAATGCTTGGACATGTCGCGTCCAATTCCAGAAATAGTAAATGCATTCGACACGGCAACGGGGATCAGTGCAAAGCGAGCAATAGCGCCGCTATTTCTCACATGGAAGGCCAAGCGCATGCTCAACGTTGGCTCCGAAAAGAAGCTCAAAGAAGCGGTTCAAATGGTCCAGAAATGGGTCTCTAATATCATTCGCAATAAAAACAATAATACCCTCCATAACCATAACCAAACACACAACAATGATTTGTTATCCCGCCTCTTGTCGACCAACCACGACGAGGAAGTCGTTAGAGACATGATTATTAGCTTCATAATGGCCGGCCGTGACACCACCTCCGCCGCCATGACATGGCTCTTCTGGTTGCTCACAAAGCACCCAAAAGCCGAACAGGCCATAATCAACGAAGCTACTTCATTGTCCGACGATTCAAAAACCATGTCGTTGGGTTATGGTTACGAAGAATTGAAGGATATGAAGTATTTGAAAGCGTGTTTATGCGAGTCCATGCGGCTATACCCGCCAGTGGCTTGGGATTCGAAGCACGCGGCGGCAGCGGACATTCTCCCGGACGGAACTCCGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCGTACGGAATGGGGAGGATGGAGGAGGTATGGGGGAAAGACCGGCTTGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAAACGGTCAGCCCGTTCAAGTTCCCGGTCTTTCAAGCGGGTCCGAGGATGTGCTTGGGAATGGAAATGGCGTTCATTCAGATGAAATACGTGGTGGCCACGGTTTTGAACCGGTTTGAATTTAGACCAGCGAGTGAAAATTCTCCGGTTTTTGTCCCGTTGTTGACAGCGCATATGGCGGGTGGACTACGGGTTTATGTTAGGGAAAGGATAGAACAAAAGTCAACTATGTGCAGTCGCTTGCGTCCCGATGATAACACATTCTACAGTCTACACCAGAAGCTCCTTCGGAGTTTTGATTTTATAGCATCGAGCAAGTGCAAGAAGACCGAGAGGACCGCACCTAGTCCGACGATATCTATCTGA 1665 48.65 MIYFSVSFLLLSSSLWAFFLLYLCISKFYCFSRKRFYYSPPSYPFFGCLISFYKNRRRLLAWYTDLLSDSPTQTIVVHRLGSRRTVVTANPANVEHMLKTNFINYPKGKPFTDILGDLLGCGIFNVDGDLWSSQRKLASHAFSAKSLREFVVKTLEDEVHLRLIPLLSNAARTNAVIDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPIPEIVNAFDTATGISAKRAIAPLFLTWKAKRMLNVGSEKKLKEAVQMVQKWVSNIIRNKNNNTLHNHNQTHNNDLLSRLLSTNHDEEVVRDMIISFIMAGRDTTSAAMTWLFWLLTKHPKAEQAIINEATSLSDDSKTMSLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTPVRKGDRVTYFPYGMGRMEEVWGKDRLEFKPDRWFQNGELKTVSPFKFPVFQAGPRMCLGMEMAFIQMKYVVATVLNRFEFRPASENSPVFVPLLTAHMAGGLRVYVRERIEQKSTMCSRLRPDDNTFYSLHQKLLRSFDFIASSKCKKTERTAPSPTISI 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30917302 30922674 - ClCG06G017820.2 Cla06g01736 275928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01736 554 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 SUPERFAMILY Cytochrome P450 29 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS E-class P450 group IV signature 393 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS E-class P450 group IV signature 359 375 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS E-class P450 group IV signature 451 469 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS E-class P450 group IV signature 298 324 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PRINTS E-class P450 group IV signature 410 428 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 Pfam Cytochrome P450 40 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PANTHER CYTOCHROME P450 20 501 - -
Cla06g01736 554 Gene3D Cytochrome P450 20 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla06g01736 554 PANTHER CYTOCHROME P450 94B3 20 501 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01225 Cla-Chr1:23831449 Cla06g01736 Cla-Chr6:30917302 5.90E-145 dispersed
Cla06g01736 Cla-Chr6:30917302 Cla10g01565 Cla-Chr10:31060071 1.10E-142 dispersed
Cla07g00067 Cla-Chr7:791984 Cla06g01736 Cla-Chr6:30917302 2.13E-150 transposed
Cla05g01409 Cla-Chr5:19279806 Cla06g01736 Cla-Chr6:30917302 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01736 K20665 - csv:101202989 862.448