Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla06g01777 ATGGGTGTGTCAAAAGATGGGCAACGACAATCTCCGGTGCCAAGCTTTGTGTATTCTGGCAACAGGGGATGTTTCCAAACCCAAACACTGGTTAGGCGCTTCCCAATTGAAGCTCCGAAAGATAATATAAAGATGTATTCACCGGCCTTCTACGCGGCTTGCACAGCAGGCGGCATTTTGAGTTGTGGACTCACCCACATGGCTGTCACCCCCCTCGATCTCGTCAAGTGCAACATGCAGATCGACCCAGCAAAGTACAAGAATATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAAAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATGGTTGGAACAGAGAATGCAGTCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTGATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGTGTCCAGACTCAACCTGGCTTTGCTCGGGGTTTGTCAGATGGCCTTCCAAAGTTTGTCAAGTCTGAGGGTGCTCTCGGACTCTACAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCATATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTTTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGAGGGTATGTGGCCGGCGTCCTCTGTGCTGTGGTCTCACACCCAGCCGACAATCTTGTCTCTTTTCTCAACAATGCCAAGGGTGCAACTGCTGGGGATGCTGTCAAGCAGCTGGGAGTATGGGGTCTCTTCACTCGTGGCCTTCCGCTTCGGATTGTTATGATTGGAACTCTTACTGGGTCGCAATGGGGTATATACGACGCGTTCAAAGTTTTCGTTGGACTGTACGTTTTTCCTTACTTCATCCTTCGTCTGAGCTCCACAGTTGCATGTAACTTGTCAGTACTTACTATATGTGATTTGCTTGAACTTGTAGGCCAACAACTGGTGGCGCTACCCCTGCTCCTGCCGCTAGCAAGTGAAGGGCGTGACACGGTTTGCGTCCCTTATTTGCCAACCAATGCGGATGGTTGTAGCTCCAAGACTTGGAAATTATTCTAA 1203 48.96 MGVSKDGQRQSPVPSFVYSGNRGCFQTQTLVRRFPIEAPKDNIKMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDMVGTENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVKQLGVWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLYVFPYFILRLSSTVACNLSVLTICDLLELVGQQLVALPLLLPLASEGRDTVCVPYLPTNADGCSSKTWKLF 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31212131 31214488 - ClCG06G018270.2 Cla06g01777 275969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla06g01777 400 Pfam Mitochondrial carrier protein 52 136 IPR018108 -
Cla06g01777 400 Pfam Mitochondrial carrier protein 148 234 IPR018108 -
Cla06g01777 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 133 IPR018108 -
Cla06g01777 400 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 31 330 IPR044677 GO:0005315|GO:1990547
Cla06g01777 400 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 31 330 - -
Cla06g01777 400 SUPERFAMILY Mitochondrial carrier 52 322 IPR023395 -
Cla06g01777 400 Gene3D Mitochondrial carrier domain 49 327 IPR023395 -
Cla06g01777 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 230 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01339 Cla-Chr5:17375930 Cla06g01777 Cla-Chr6:31212131 8.95E-180 dispersed
Cla06g01777 Cla-Chr6:31212131 Cla05g00130 Cla-Chr5:1221981 5.97E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla06g01777 K15102 - csv:101220423 612.838