Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00061 ATGGAAGAGGTTGAAGAAGCTAACAAATCAGCCATAGAGAGCTGCCATGGAGTTTTGAATCTTTTAGTTCAACCTCCTCAAGACCAACTTCATTTCAGGAATCTAATGGTTGAAACTAAAGAAGCTGTTTTCAAGTTCAAGAAAGTTATTTCTCTCTTAAATTCTGGTTTTGGTCATGCCAGAGTTAGAAAATTCAACAAGATTCCTCTCCCTTTGCCTCAAAAATCCCTCTTAGATTCCCCAAATTACACTCCACATCCTCCAAACAAAAATCTTTACCCTTTTCACTCTGGTTTGAATGGTAAAGTTTCAATTTTTTTGGGAAACCCAGATTTACAATTGAGTCCAAATGACAAGAATTCCCTCCAAATTCCCAAAAAATCTCCATCTTTAAACTTCAGCTTCCCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGAGGATTTTGGCTCATCAGAAACAAATGAAACAGCAAGCAGAAATGATGTTTCTAAGGAATAACAGTGGGATGAACCTGAATTTTGACACATCTAATTGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGCAGCGTCGCCGACGGAAGCTCGTTCCATTTGATCGGACCGTCGTCAACGACAACGACGTCGGCCGATAACAAGAGGAAGTTTTCTGCAAGAGGAGATGAAGGAAGCTTGAAATGTGGAAGTTCTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTACCTGCCATAAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCGGCGAGAAAGCATGTTGAGCGGTGCTTAGAAGACCCGTCGATGCTTATTGTAACGTATGAAGGAGAGCATAATCACCCGAAAATGTCGACGCAATCTGCACACACTTAG 1026 41.91 MEEVEEANKSAIESCHGVLNLLVQPPQDQLHFRNLMVETKEAVFKFKKVISLLNSGFGHARVRKFNKIPLPLPQKSLLDSPNYTPHPPNKNLYPFHSGLNGKVSIFLGNPDLQLSPNDKNSLQIPKKSPSLNFSFPQQQQQQQQQQQQQQQRILAHQKQMKQQAEMMFLRNNSGMNLNFDTSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTTTTSADNKRKFSARGDEGSLKCGSSGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 678123 679836 + ClCG07G000660.2 Cla07g00061 276049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00061 341 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 341 IPR044810 GO:0003700
Cla07g00061 341 PANTHER WRKY TRANSCRIPTION FACTOR 74-RELATED 2 341 - -
Cla07g00061 341 MobiDBLite consensus disorder prediction 212 226 - -
Cla07g00061 341 MobiDBLite consensus disorder prediction 116 158 - -
Cla07g00061 341 SMART WRKY_cls 273 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla07g00061 341 Pfam Plant zinc cluster domain 237 271 IPR018872 -
Cla07g00061 341 ProSiteProfiles WRKY domain profile. 268 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla07g00061 341 Gene3D WRKY domain 257 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla07g00061 341 MobiDBLite consensus disorder prediction 212 234 - -
Cla07g00061 341 SUPERFAMILY WRKY DNA-binding domain 271 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla07g00061 341 Pfam WRKY DNA -binding domain 275 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01369 Cla-Chr6:27212737 Cla07g00061 Cla-Chr7:678123 1.15E-48 dispersed
Cla07g00061 Cla-Chr7:678123 Cla09g00706 Cla-Chr9:6895715 5.90E-133 dispersed
Cla07g00061 Cla-Chr7:678123 Cla09g00705 Cla-Chr9:6879887 5.90E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61358 PF03106 WRKY 1.20E-26 CL0274 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00061 - - csv:101214847 571.237