Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00061 | ATGGAAGAGGTTGAAGAAGCTAACAAATCAGCCATAGAGAGCTGCCATGGAGTTTTGAATCTTTTAGTTCAACCTCCTCAAGACCAACTTCATTTCAGGAATCTAATGGTTGAAACTAAAGAAGCTGTTTTCAAGTTCAAGAAAGTTATTTCTCTCTTAAATTCTGGTTTTGGTCATGCCAGAGTTAGAAAATTCAACAAGATTCCTCTCCCTTTGCCTCAAAAATCCCTCTTAGATTCCCCAAATTACACTCCACATCCTCCAAACAAAAATCTTTACCCTTTTCACTCTGGTTTGAATGGTAAAGTTTCAATTTTTTTGGGAAACCCAGATTTACAATTGAGTCCAAATGACAAGAATTCCCTCCAAATTCCCAAAAAATCTCCATCTTTAAACTTCAGCTTCCCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGAGGATTTTGGCTCATCAGAAACAAATGAAACAGCAAGCAGAAATGATGTTTCTAAGGAATAACAGTGGGATGAACCTGAATTTTGACACATCTAATTGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGCAGCGTCGCCGACGGAAGCTCGTTCCATTTGATCGGACCGTCGTCAACGACAACGACGTCGGCCGATAACAAGAGGAAGTTTTCTGCAAGAGGAGATGAAGGAAGCTTGAAATGTGGAAGTTCTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTACCTGCCATAAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCGGCGAGAAAGCATGTTGAGCGGTGCTTAGAAGACCCGTCGATGCTTATTGTAACGTATGAAGGAGAGCATAATCACCCGAAAATGTCGACGCAATCTGCACACACTTAG | 1026 | 41.91 | MEEVEEANKSAIESCHGVLNLLVQPPQDQLHFRNLMVETKEAVFKFKKVISLLNSGFGHARVRKFNKIPLPLPQKSLLDSPNYTPHPPNKNLYPFHSGLNGKVSIFLGNPDLQLSPNDKNSLQIPKKSPSLNFSFPQQQQQQQQQQQQQQQRILAHQKQMKQQAEMMFLRNNSGMNLNFDTSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTTTTSADNKRKFSARGDEGSLKCGSSGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 678123 | 679836 | + | ClCG07G000660.2 | Cla07g00061 | 276049 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00061 | 341 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 341 | IPR044810 | GO:0003700 | |
Cla07g00061 | 341 | PANTHER | WRKY TRANSCRIPTION FACTOR 74-RELATED | 2 | 341 | - | - | |
Cla07g00061 | 341 | MobiDBLite | consensus disorder prediction | 212 | 226 | - | - | |
Cla07g00061 | 341 | MobiDBLite | consensus disorder prediction | 116 | 158 | - | - | |
Cla07g00061 | 341 | SMART | WRKY_cls | 273 | 333 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00061 | 341 | Pfam | Plant zinc cluster domain | 237 | 271 | IPR018872 | - | |
Cla07g00061 | 341 | ProSiteProfiles | WRKY domain profile. | 268 | 334 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00061 | 341 | Gene3D | WRKY domain | 257 | 333 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00061 | 341 | MobiDBLite | consensus disorder prediction | 212 | 234 | - | - | |
Cla07g00061 | 341 | SUPERFAMILY | WRKY DNA-binding domain | 271 | 333 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00061 | 341 | Pfam | WRKY DNA -binding domain | 275 | 332 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g01369 | Cla-Chr6:27212737 | Cla07g00061 | Cla-Chr7:678123 | 1.15E-48 | dispersed | |
Cla07g00061 | Cla-Chr7:678123 | Cla09g00706 | Cla-Chr9:6895715 | 5.90E-133 | dispersed | |
Cla07g00061 | Cla-Chr7:678123 | Cla09g00705 | Cla-Chr9:6879887 | 5.90E-133 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61358 | PF03106 | WRKY | 1.20E-26 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00061 | - | - | csv:101214847 | 571.237 |